Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02983 ATGGAGGCTCACGCGAGCTCCTTCGTGTCCAAAGCGCGAACTGCGTTCCATTCCGCAGCCGCGAAAGCGGAGCGTGTTCTCATGGACTTCAAAATCGATCTAGATTCTGATAAGCAATTTCACGACGAGTTTGGGAGGCAGCGGGGCGATGAATCTGCTCGGAGTGAGAAGTTTCTTGATGAACTGAAGCATATAAAGTGGAGACCTCCACATATAGGAACAAAGCAGGACTGGCAAGATAGAATAAACAACATGCGAAAAGGGAGAAAGGAAGTCGAAGTAACAGATAAAGTTGGCGATGTAAGCATGGCCTCTGCTCCATTTTATGATGAAAATATGTACATCCTCAATGTGAAAAATGATCTTGATGCCAAGGCTTCAGAAGCAATTCCCTCGGTTGAAGGCTTAACTGCTGCGACCAAATACCCCATTCCTCCATCATCTGTCCTGAAGCAGTTGGCTATAGCTATTGAGTCTGGAAGGCAAACAAACTCGATGAAAGATTTTGTAGCTTCATCAAGAGGTTCGTCACCTGCCAGAGAGAAGGCAGGCTTAAGTCTCTCTTCAGTGAAGGCTTTAGTGTTGCGTGAAAAGGAGGACAAACTCACCTCTGAGTTTAGTAGTGATGAGAAAGTTGTGTATTTGATTAATTCATTGTTTGATCAAGAGGGAGAGTTCCTTAAAAGGAACTCTGATCCAGAGGAAACTTTCATATCATCTTTGCCAAGAGATATTCATGGTGCACCTCTTGAAAGCCTAGTTGTTAAGCTAGCTGAAGTAATCGGAAACTTCAAGACGCTTCGAGAAATGTCTCTTTTTTGGTCCAGGGTTGTTGATGAACTGAGAAAACATTGGTCCGAAGAAAAACATTTGCCTGGAATCCCCCCAGATGACATTCCAGATCTGAAGTCATGTCTTCTGTATCAACAATTTCAAGTAATTAATTGTTGCATCTCTCGGAAAAAGCGCCATATTATTGCCACTGAATCTCTGGACACTATGGTGATGGAAGCCAATTCAAATGCATTAGAGTCAGCAAACTACACGGGCAAAATTCCTACAGGCCCTTTATTATATGCAAGATTAAGAACTGGAGAGCTTGTTCTCCGACTTGGTGCTGATTGCCCATCTGGAGATTTGACATTACTGGAGACTGGCGAGCCGGCATACTCTCCTGTCACCCAGGAGGGACCCTTGCTTACAGAAGATCTGATCAAAGAGACAGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGTGCTGGATGCTCTCAACTCCTCTCTGATATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGCATTTTGGAAGATTTTGTGAGATGGTACTCTCCTCCTGATTGGAGTGAAAGTGAGGGAAGTACTGAGGATAGAGATTCTTCTTATGGTGGGGAGTCAATGTCTACCAGAGGTCAACTAAGTTTGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCTAAACCAGTTCCAGCTGTTAAACAGGCACCTCTCTATGATGAGGATTTGGCAGTGGAGGACATTCTAGATGCATTTGAGGACATCCAGCCTTCAGAGCTTTTTGGACAGCTGTTTGTTTCTCTTCTCAGTTTTGGATTTGCAATTGCTGAAACTATGCTGTATGGCGACCTTGATCTCTCAAAGTTGTTCAATGATTGCAAGGAGTACATAGTTACCACGTGTCAGAGTGACAGATTCAATGAGAAAATCGATGAACTTGTTCAGATGTATGAAACAGTGGAGAAAATGTTGCTGAATCCAGATGAGGCATTGAAGATGAAGCACATGGAAGAATCAACTATGACTACTGATGAATCAAAGCGCCGGTTTTCTACTGGTGAGCCAAAGCACCGGTTTAAGAGACTTAGCCATATCTTTGGTGGCAAGGATAAACTGTTGACAAGGCCGGTCTGTAAAAACGAGGTAAACGATGAAGAAACGCAGATTCGACATTCTTTCTCGAGTTTCTTTGACAGCAAGTCATCTTTATTTTCAAAGAAGCCACCTAAGCCTGGAAACCTATACCCTGCTGAGCAACCTCTCTCTCTGGAAAGTGACAGGACAGTTATTTAG 2100 0.4376 MEAHASSFVSKARTAFHSAAAKAERVLMDFKIDLDSDKQFHDEFGRQRGDESARSEKFLDELKHIKWRPPHIGTKQDWQDRINNMRKGRKEVEVTDKVGDVSMASAPFYDENMYILNVKNDLDAKASEAIPSVEGLTAATKYPIPPSSVLKQLAIAIESGRQTNSMKDFVASSRGSSPAREKAGLSLSSVKALVLREKEDKLTSEFSSDEKVVYLINSLFDQEGEFLKRNSDPEETFISSLPRDIHGAPLESLVVKLAEVIGNFKTLREMSLFWSRVVDELRKHWSEEKHLPGIPPDDIPDLKSCLLYQQFQVINCCISRKKRHIIATESLDTMVMEANSNALESANYTGKIPTGPLLYARLRTGELVLRLGADCPSGDLTLLETGEPAYSPVTQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWSESEGSTEDRDSSYGGESMSTRGQLSLRMQKEGNLWRELWETSKPVPAVKQAPLYDEDLAVEDILDAFEDIQPSELFGQLFVSLLSFGFAIAETMLYGDLDLSKLFNDCKEYIVTTCQSDRFNEKIDELVQMYETVEKMLLNPDEALKMKHMEESTMTTDESKRRFSTGEPKHRFKRLSHIFGGKDKLLTRPVCKNEVNDEETQIRHSFSSFFDSKSSLFSKKPPKPGNLYPAEQPLSLESDRTVI 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02983 699 MobiDBLite consensus disorder prediction 452 476 - -
Gma08g02983 699 Pfam Rab3 GTPase-activating protein catalytic subunit 370 522 IPR026147 -
Gma08g02983 699 MobiDBLite consensus disorder prediction 668 699 - -
Gma08g02983 699 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 699 IPR045700 GO:0005096|GO:0043547
Gma08g02983 699 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02983 Gma-Chr8 46392606 46400630 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02983 K18270 - gmx:100800515 1363.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02983 08 46392606 46400630 Gma08g02983 08 46392606 46400630 ECH
Gma18g00818 18 9387604 9396371 Gma08g02983 08 46392606 46400630 GST
Gma08g02983 08 46392606 46400630 Gma14g00193 14 1609630 1617767 PCT
Gma08g02983 08 46392606 46400630 Gma02g02744 02 53120519 53127927 PCT
Gma14g00193 14 1609630 1617767 Gma08g02983 08 46392606 46400630 PCT
Gma02g02744 02 53120519 53127927 Gma08g02983 08 46392606 46400630 PCT