Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02744 ATGACTCTCAGCGTTTCAATCCTGACCTCATCATCTTCGCGTGTGCGCAGGGAATGGAGGAGCAGACTTTTGTTTCCAAAGCGAGAACCGCCTTTCATTCCGCGGCGGCGAAAGCGGAGCGTGTTCTCTTGGATTTCAAATCCGATCGAGTTATTATTGTTTTCGGAATTAGCATTGACTCAATTTGTTGACCGTCGTGAAGAAGATCACGATAAGCAATCGTCGCCAAACACCTTCACCGGCCAACAACCAGAAGCTGAATCTCCTCACACCAACGAAAACGATTCCAAGCTTCGTAGTGAATTGAAGCATATAAAGTGGAGGCCTCCACATTTAGGAATAAAGCAGGATTGGCAGGATAGAATAAAGAACATCCGTAGAGGGAGAAAAGAAGTTGAAGATACAGATAAAGTTGGGGATGCAAGCATGGCAGTTCCTTTTTATGACGATAATTTGTACCTCCTGAACATGAAGAATGATCTTGAGGCCAAGGCTTCAGAAGCAATTCCCTCAGTTGAAAGCTTAACTGCTGCAACTAAAGATCCCATTCCTCCATCATCTGTGCTAAAGCAATTGGCTATAGCTGTTGAGGCTGGAAGTAAGGCAAAGTCAATGAAAGATTTAATAGCTTCATCAGGAGTTTCTTCACCTGCTAGAGAGAGGGCAGGCTTAAGTTTCTCGGCAGTTAAGGCTTTAGTGCTACGTGAAAAGGAGGACAAACTTACATCTGAGTTTACTAGCAATGAGAAAGTTGTGCAGTTAATTAATTCTCTGTTTGATCCAGAAGGAGATTTCCTTAGAAGAAAGATCAACTCTAATCTAGAGGAAACTGCTATGACATCTTTGCCAAGAGATATTCATGGTGCACCTCCCGAGAGCCTTGTTGTTAAGCTAGCTGAAATCCTTGGAAACTACAAGACTCTTAGAAAAATGGCTCTTTTCTGGTGCAGGGTTGTTGCTGAACTAAGAAAACTATGGTCTGAGGAACAATACTTACCAGGAGTCCCCCAGAATGAGATTCCTGATCTGAAGTCATGTCTTCTATATCAACATTTTCAAGTAATTAATTGCTGCATCTCTCGGAAAAGGTTCCGTATTATTGCCACCGAATCTTTAGACTCTATGATGATGCAAGCTAATTCAGACATAAAAGAATCAACTGATTGTTGCGCTGGAGCTCCTGCAAGCCCTGTTCTATATGCTAGATTGAATAGTGGGGAGCTTGTTCTTCGACTTGGTGCAGATCATCCTGCTGGAGATATGACATTGTTGGAAACTGGCGAGCCTGTGTATTCTCCAATCACTCAGGAAGGACCTTTGCTTACAGAAGATCTAATCAGGGAAACAGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGTGCTGGGTGCTCTCAACTGCTCTCAGATATGCAAGCTTTCAAGGCTGCAAATCCTGGATGTATCTTGGAGGATTTTGTAAGATGGTACTCTCCTCCTGATTGGACAGATAATGAAGCAAGTACAGAGGATAGTGATGTTTTTGATAGTGGGGAGCCATTGTCTACCAGAGGTCAGCTAAGTCAGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCCAAACCAGTACCTGCTGTTAAGCAGGCACCTCTGTTTGATGAGGATTTGGCATTGGAGGGCATCCTCAATGCATTTGAAGACATCCATCCATCTGATCTTTTTGGACAGCTGTTTGTTTCGTTACTTGGTTTAGGATTTGCAATTGCCGAACCTATGCTGTCTAGTAACAGTGACTTCTCGAAGTTATTCTATGACTGCAAGGAGTACATAATTGTTGCTTGTCAAAACAACAAATTGAATGAGAAAGTTGATGATCTTGTTCAGGTATATGAAACAGTGGAGAAAATGTTATTGGATCCTGAAGAAGCTCTAAAGATGATTAGGCAGACAGAGGAATCAACAATGGTTACCGGTGAACCAAGGAGCCCGTTTAGGACGCTTAGCCTTATCTTTGGAGGCAAAGATAAATTATTGAGGAAGTCTGTCTCAAAAGATCAGACAAACGACGAAGAGAAGTCAGGTCGGCAGTCATTCTCTAGTTTCTTTGACAGCAAGTCATCTTTGTTTGGAAAGAAGCCTCCCAAGTCTGGGTTCCCATCTCCTTCTGCTAAATCTTCAATCGATACTGGTTGGACAGTTGTTTAG 2196 0.4285 MTLSVSILTSSSSRVRREWRSRLLFPKREPPFIPRRRKRSVFSWISNPIELLLFSELALTQFVDRREEDHDKQSSPNTFTGQQPEAESPHTNENDSKLRSELKHIKWRPPHLGIKQDWQDRIKNIRRGRKEVEDTDKVGDASMAVPFYDDNLYLLNMKNDLEAKASEAIPSVESLTAATKDPIPPSSVLKQLAIAVEAGSKAKSMKDLIASSGVSSPARERAGLSFSAVKALVLREKEDKLTSEFTSNEKVVQLINSLFDPEGDFLRRKINSNLEETAMTSLPRDIHGAPPESLVVKLAEILGNYKTLRKMALFWCRVVAELRKLWSEEQYLPGVPQNEIPDLKSCLLYQHFQVINCCISRKRFRIIATESLDSMMMQANSDIKESTDCCAGAPASPVLYARLNSGELVLRLGADHPAGDMTLLETGEPVYSPITQEGPLLTEDLIRETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWTDNEASTEDSDVFDSGEPLSTRGQLSQRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLALEGILNAFEDIHPSDLFGQLFVSLLGLGFAIAEPMLSSNSDFSKLFYDCKEYIIVACQNNKLNEKVDDLVQVYETVEKMLLDPEEALKMIRQTEESTMVTGEPRSPFRTLSLIFGGKDKLLRKSVSKDQTNDEEKSGRQSFSSFFDSKSSLFGKKPPKSGFPSPSAKSSIDTGWTVV 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02744 731 MobiDBLite consensus disorder prediction 66 98 - -
Gma02g02744 731 MobiDBLite consensus disorder prediction 497 516 - -
Gma02g02744 731 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 68 721 IPR045700 GO:0005096|GO:0043547
Gma02g02744 731 Pfam Rab3 GTPase-activating protein catalytic subunit 411 563 IPR026147 -
Gma02g02744 731 MobiDBLite consensus disorder prediction 75 89 - -
Gma02g02744 731 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 68 721 - -
Gma02g02744 731 Coils Coil 613 633 - -
Gma02g02744 731 Coils Coil 115 135 - -
Gma02g02744 731 MobiDBLite consensus disorder prediction 716 731 - -
Gma02g02744 731 MobiDBLite consensus disorder prediction 678 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02744 Gma-Chr2 53120519 53127927 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02744 K18270 - gmx:100798096 1417.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02744 02 53120519 53127927 Gma02g02744 02 53120519 53127927 ECH
Gma14g00193 14 1609630 1617767 Gma02g02744 02 53120519 53127927 GST
Gma18g00818 18 9387604 9396371 Gma02g02744 02 53120519 53127927 PCT
Gma08g02983 08 46392606 46400630 Gma02g02744 02 53120519 53127927 PCT
Gma02g02744 02 53120519 53127927 Gma18g00818 18 9387604 9396371 PCT
Gma02g02744 02 53120519 53127927 Gma08g02983 08 46392606 46400630 PCT