Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00193 ATGGAGGAGGAGCAGCAGACTTTTGTGTCCAAAGCGAGAACCGCCTTTCATTCCGCCGCGGCCAAAGCGGAGCGCGTTCTCTTGGATTTCAAATCCGATCGAGAAGATCACGATAAACAATCGTCGCCCAACACCTTCACCGGCCAACAACCAGAAGCTGAATCTCCTCACACCGACGAAAACGACTCCAAGCTTCATAGTGAATCGAAGCATATAAAGTGGAGGCCTCCACATTTAGGAATTAAGCAGGATTGGCAAGATAAAATAAAGAACATCCGGAGAGGGAGAAAAGAAGTTGAAGATACAGATAAAGTTGGGGATGCAAGCATGGCAATTCCATTTTATGATGATAATTTGTACCTCCTGAATGTAAAGAATGATCTCGAGGCCAAGGCTTCAGAAGCAATGCCCTCAGTTGAAGGCCTCACTGCTGCAACTAAAGATCCCATTCCTCCATCATCTGTGCTAAAGCAATTGGCTATAGCTGTTGAGGCTGGAAGTAAAGCAAAGTCAATGAAAGATGTTATAGCTTCACCAGGAGGTTCTTCACCTGCTAGAGAGAGGGCAGGCTTAAGTCTCTCAGCAGTTAAGGCTTTAGTGCTACGGGAAAAGGAGGACAAACTTACATCTGAGTTTACTAGCAATGAGAAAGTTGTGCAGTTAATTAATTCTCTGTTTGATCCAGAAGGAGATTTCCTTAGAAGAAAGATCGACTCTAATCTGGAGGAAACTGCTATGACATCTTTGCCAAGAGATATTCATGGTGCGCCTCCCGAAAGCCTTGTTGTTAAGCTAGCTGAAATCCTTGGAAACTACAAGACTCTTCGAAAAATGGCTCTTTTCTGGTGCAGGGTTGTTGCTGAACTAAGGAAACTTTGGTTCGAGGAACAATACTTACCAGGAGTCCCCCAGGATGAGATTCCTGATCTGAAGTCATGTCTTCTATATCAACAATTTCAAGTAATTAATTGCTGCATCTCTCGGAAAAGGTTCCGTATTATTGCCACTGAATCTTTAGACTCTATGATGATGCAAGCTAATTCAGACATAAAAGAATCAACTGATTGTAGCGCTGAAGCTTCTGCAAGCCCTGTTCTATATGCTAGATTGAATAGTGGGGAGCTTGTTCTTCGACTTGGTGCTGATCATCCTGCTGGAGATATGACATTGTTGGAAACTGGCGAGCCTGTGTATTCTCCAATCACTCAGGAAGGACCTTTGCTTACAGAAGATCTAATCAGGGAAACAGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGTGCTGGGTGCTCTCAATTGCTCTCAGATATGCAGGCTTTCAAGGCTGCAAATCCTGGATGTATTTTGGAGGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGATAATGAAGCAAGTACAGAGGATAGTGATGTTTTTGATAGTGGTGAGCCATTGTCTGCCAGAGGTCAGCTAAGTCGGCGAATGCAAAAAGAAGGTAATTTATGGCGTGAATTGTGGGAAACATCCAAACCAGTACCTGCTGTTAAGCAGGCGCCTCTGTTTGATGAGGATTTGGCAGTGGAGGGCATCCTCAATGCATTTGAAGAAATGCATCCATCTGATCTTTTTGGACAGCTGTTTGTTTCTTTACTTGGTTTAGGATTTGGAATTGCCGAACCTATGCTGTCTGGTAACAGTGACTTCTCGAAGTTATTCTATGACTGCAAGGAGTACATAATTACTGCTTGTCAAAACAACAAATTGAATGAGAAAGTTGATGGTCTCGTCCAGGTATATGAAACAGTGGAGAAAATGTTATTGAATCCTGAAGAAGCTCTAAAAATGATTAAGCAGACAGAGGAATCAACTACAGTTACCGGTGAACCAAGGAGCCCGTTTAAGAGGCTTAGCCTTATCTTTGGAGGCAAAGATAAACTATTGAGGAAGTCTGTCTCAAAAGATCAGACAAACGACGAAGAAAAGTCAGGTCGGCAATCATTCTCCAGTTTCTTTGACAGCAAGTCATCTTTGTTTGGAAAGAAGCCTCCCAAGTCTGGATCCCCATCTCCTTCTGAGAAATCTTCTATCGATACTGGTTGGCCAGTTGTTTAG 2097 0.434 MEEEQQTFVSKARTAFHSAAAKAERVLLDFKSDREDHDKQSSPNTFTGQQPEAESPHTDENDSKLHSESKHIKWRPPHLGIKQDWQDKIKNIRRGRKEVEDTDKVGDASMAIPFYDDNLYLLNVKNDLEAKASEAMPSVEGLTAATKDPIPPSSVLKQLAIAVEAGSKAKSMKDVIASPGGSSPARERAGLSLSAVKALVLREKEDKLTSEFTSNEKVVQLINSLFDPEGDFLRRKIDSNLEETAMTSLPRDIHGAPPESLVVKLAEILGNYKTLRKMALFWCRVVAELRKLWFEEQYLPGVPQDEIPDLKSCLLYQQFQVINCCISRKRFRIIATESLDSMMMQANSDIKESTDCSAEASASPVLYARLNSGELVLRLGADHPAGDMTLLETGEPVYSPITQEGPLLTEDLIRETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASTEDSDVFDSGEPLSARGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNAFEEMHPSDLFGQLFVSLLGLGFGIAEPMLSGNSDFSKLFYDCKEYIITACQNNKLNEKVDGLVQVYETVEKMLLNPEEALKMIKQTEESTTVTGEPRSPFKRLSLIFGGKDKLLRKSVSKDQTNDEEKSGRQSFSSFFDSKSSLFGKKPPKSGSPSPSEKSSIDTGWPVV 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00193 698 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 6 689 - -
Gma14g00193 698 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 6 689 IPR045700 GO:0005096|GO:0043547
Gma14g00193 698 MobiDBLite consensus disorder prediction 27 41 - -
Gma14g00193 698 MobiDBLite consensus disorder prediction 645 698 - -
Gma14g00193 698 MobiDBLite consensus disorder prediction 460 479 - -
Gma14g00193 698 MobiDBLite consensus disorder prediction 55 76 - -
Gma14g00193 698 Coils Coil 82 102 - -
Gma14g00193 698 Pfam Rab3 GTPase-activating protein catalytic subunit 378 530 IPR026147 -
Gma14g00193 698 MobiDBLite consensus disorder prediction 27 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00193 Gma-Chr14 1609630 1617767 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00193 K18270 - gmx:100818643 1338.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00193 14 1609630 1617767 Gma14g00193 14 1609630 1617767 ECH
Gma14g00193 14 1609630 1617767 Gma02g02744 02 53120519 53127927 GST
Gma18g00818 18 9387604 9396371 Gma14g00193 14 1609630 1617767 PCT
Gma08g02983 08 46392606 46400630 Gma14g00193 14 1609630 1617767 PCT
Gma14g00193 14 1609630 1617767 Gma18g00818 18 9387604 9396371 PCT
Gma14g00193 14 1609630 1617767 Gma08g02983 08 46392606 46400630 PCT