Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00251 ATGGCCAGCCATAACTACAAAGTCTTCAGCTGCTTCAACAGGAAGTTCACCGTCACCGAGCCGGGCCCACCGCCGGACGTCCAAAAAGCGTTTTCTGAATTTGCCGACGGAGCCTCCTCCCTGTCCGGCGATCACCTCCTCCGATTTCTGGCGAAGCACCAGGGCGAAGTGGACTGCACCGCAGTGGATTCGGAGCGGATCCTCCAGCAATCGCGGAAAGAGGATCGGGAAAGTGGACTGGATCTCCACGACTTCTTCCGTTTCCTGCTACATGACGATTTCAATAGCCCCATCAAATCTCAGGTACATCATGATATGACTGCTCCATTGTCACATTATTTCATTTATACTGGGCACAATTCCTATCTTACCGGGAATCAACTGAGCAGTGACTGCAGTGATGTGCCAATCATAAAGGCTTTGCAACGAGGTGTGAGAGTAATTGAACTAGATTTATGGCCAAATTCAGACGAAGATGATATCGAAGTAGTTCATGGAAGGACTCTTACCACTCCTGTCTCACTCATCCAATGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTCATTACCCACTCATTATAACTTTAGAAGATCACCTTACTCCAGATCTTCAAGCTAAAGCTGCAGAGATGGCAACTCAAGTATTTGGAGAATTGCTTTATTATCCTCAGACAGATTCTCTGATGGAATTCCCCTCACCGGAATCATTGAAAGGCCGAATTCTTATATCAACCAAACCACCAAAAGAATTTCTTGAATCCAAAGAATATGATGACAAGGACAATGaaaaggaatcagctgacgagctttcatcattgccagatcaaactagtgaacaggaaactgatgataAGCAGAGTGCACCTGAGTACAAACACTTGATTACAATCCATGCTGGGAAACCAAAGGGTGATATACAGGATGAATTAAAAGCTGCTGGAGCAGTTAGGCGCTTAAGCTTAAGTGAACAAGCACTTGAAAAGGCTTCTGAATCTTATGGAGCTGATATTGTTAGGTTTACACAGAACAATATTCTCAGAGTATATCCAAAGGGAACACGTCTCAATTCCTCAAATTACAAGCCACACATAGGGTGGACGTATGGAGCTCAGATGGTTGCGTTTAACATGCAGGGGTATGGCAAATCACTTTGGTACATGCAAGGAATGTTTAGAGCAAACGGACGGTGCGGTTATGTGAAAAAACCTGAATTTCTTATTGAGAAAGGTCCACATAATGAGGTTTTTGATCCTAGAAGAACATTGCCTGTGAAGAAAACATTAAAGGTAAAAGTCTATATGGGGACTGGTTGGAGCTTAGATTTCAGCCAAACAGACTTTGATACTTACTCGCCACCAGATTTTTATGTTAAGGTTTGTATTGTTGGAGTTCCTGCTGATATGGCCAAGAAGAAAACAAGTGTAATTTCAAATAACTGGTTTCCTGTTTGGGATGAAGAGTTTGATTTCCCTTTGACTGTTCCAGAACTGGCTTTGCTCCGCATAGAAGTTCGAGAGAATGATAAGAGTCAGAAGGATGACTTTGGTGGACAGACATGTTTGCCTGTCTCAGAGCTAAAATCTGGATTCCGATCAGTCCCTCTCCATGATGAAAAGGGGATGAAAGTTGATTCATCAAGTGCAATAAGGAGTAGGACACCCCGTGTCCGTGGTTATGCTTTGGCACTGGACAGTACCTTAAGGATTATCCCATTACATTTGGTGGAGTTTGCAATGAAGCATGCATGGGCAGCGGAAACATCTGTGAAAGATAGACCAACCATGGATGACACATCATATGAGAACAAATTATTCCCCGAAGCCTACTTTGGGCGATCTGATGAACAATTCAAAGAGAGTGATAAAGTTGGAACAAACACCCAAAGGAGTGCCAAGTGCCTAACATCTAATCCATTGGAGGGTTACAAGTGGGCCCCCCCATGCATTCTGAGTCTGGAAACACCCAAACGTATCTTCACGACAAGACAACATCTTCATTGCCAACGAACACAAGAAACGCTCCCCGTGTCGGAGGCCCCGCCGGAGATAAGGACCCTTTTCGACCGTTACTCCGATCAGAATGGCGTCATGACAGCCACTCACCTCCGAAGTTTCCTGGCTGAGGTGCAGAGGGAAGACAATGCCACTGAGGAGGAAGCACAAACCATCATCGATGGCCACAAGCATCTCAGTATCTTTCACCGAAGAGGTCTCAATCTCGAGAGTTTCTTCAACTATCTTTTTAGTCACCATAATAACCCACCTCTCTCGCCCTCTATTGGGGTGCACCAAGATATGTCTTCACCATTGTCTCATTACTTCATTTATACTGGTCATAATTCCTATCTAACTGGGAACCAGCTTAGCAGTGACTGCAGTGACATCCCCATCATCAATGCACTGCAGAAGGGCGTAAGGGTGATTGAGTTAGATATATGGCCTAATGAATCAAAGGATAATGTGGATGTTCTTCATGGAAGGACTTTGACATCTCCTGTGGCACTCATCAAATGTTTGAGGTCTATTAAGCAGCATGCCTTTGTTGCCTCAGAATATCCAGTTGTAATAACCTTAGAAGACCATCTAACTCCCGACCTTCAGGCCAAAGTGGCTGAGATGATTACTCGAACATTTGGAGACACACTATTTGCTCCTACCTCAAAAAGCTTGAAGGAATTTCCTTCTCCTGAATCACTTAAAAGGAGGGTTATTATATCAACCAAACCACCTAAGGAGTACCTTGAGGCAAAAGAAGTACAGGAAACAGAGGAGGAACCACAACAGGAAAAGCCTGCAGATGATGAAGAAGCATGGGGGAAGGAAGTCCCTAGTTTGAGAGGTGGAACTATCTCTGATTACAAGaacattgaggatgatgatgttcttgatgatgaggaagatattgatgaagcagagaaGTCACGTCAAGATGCAGCAGATGAATACAGACGTTTAATTGCCATTCATGCTGGGAAGCCTAAAGGTGGATTAACGGAATGTCTCAAAGTGGATCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGCTACAGCTTGAAAAGGCTGCTGAAACTCATGGAAAAGAAATTGTCAGATTTACTCAACGGAATATACTGAGAGTGTATCCAAAAGGTACTCGCATTACTTCGACAAATTATAACCCATTGATTGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGGTATGGTAGATCTCTTTGGTTGATGCAGGGAATGTTCAAAGCCAATGGCGGATGCGGTTATGTTAAAAAACCAGATTTTCTATTAAAGGTTGGTCAAAATAATGAGGTCTTTGATCCTAAAGCTCATTTGCCTGTGAAGACAACCTTGAAGGTGACTATATATATGGGGGAAGGATGGTTTCATGATTTCAAGCATACACACTTTGATAAATTCTCACCCCCGGACTTCTATGCAAGAGTGGGGATTGCTGGAGTCCCTAATGATACTGTTATGAAAAAAACTGAGAAAGTAGAGGATAATTGGTCACCTTCGTGGAATCAAGTATTTGAGTTCCCACTTGCTGTTCCAGAACTGGCTCTGCTTCGCGTAGAAGTTCATGAGTATGACATGTCTGAGAAGGATGACTTTGGTGGCCAAACGTGCTTACCTGTGTGGGAACTAAGAAGTGGAATTCGAGCAGTTCCACTGTATTCCCGCAATGGAGATAAGTATGCCAATGTGAAGCTTCTCATGCGCTTTGAATTCATTTGA 3750 0.4224 MASHNYKVFSCFNRKFTVTEPGPPPDVQKAFSEFADGASSLSGDHLLRFLAKHQGEVDCTAVDSERILQQSRKEDRESGLDLHDFFRFLLHDDFNSPIKSQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSDEDDIEVVHGRTLTTPVSLIQCLKSIKEYAFVKSHYPLIITLEDHLTPDLQAKAAEMATQVFGELLYYPQTDSLMEFPSPESLKGRILISTKPPKEFLESKEYDDKDNEKESADELSSLPDQTSEQETDDKQSAPEYKHLITIHAGKPKGDIQDELKAAGAVRRLSLSEQALEKASESYGADIVRFTQNNILRVYPKGTRLNSSNYKPHIGWTYGAQMVAFNMQGYGKSLWYMQGMFRANGRCGYVKKPEFLIEKGPHNEVFDPRRTLPVKKTLKVKVYMGTGWSLDFSQTDFDTYSPPDFYVKVCIVGVPADMAKKKTSVISNNWFPVWDEEFDFPLTVPELALLRIEVRENDKSQKDDFGGQTCLPVSELKSGFRSVPLHDEKGMKVDSSSAIRSRTPRVRGYALALDSTLRIIPLHLVEFAMKHAWAAETSVKDRPTMDDTSYENKLFPEAYFGRSDEQFKESDKVGTNTQRSAKCLTSNPLEGYKWAPPCILSLETPKRIFTTRQHLHCQRTQETLPVSEAPPEIRTLFDRYSDQNGVMTATHLRSFLAEVQREDNATEEEAQTIIDGHKHLSIFHRRGLNLESFFNYLFSHHNNPPLSPSIGVHQDMSSPLSHYFIYTGHNSYLTGNQLSSDCSDIPIINALQKGVRVIELDIWPNESKDNVDVLHGRTLTSPVALIKCLRSIKQHAFVASEYPVVITLEDHLTPDLQAKVAEMITRTFGDTLFAPTSKSLKEFPSPESLKRRVIISTKPPKEYLEAKEVQETEEEPQQEKPADDEEAWGKEVPSLRGGTISDYKNIEDDDVLDDEEDIDEAEKSRQDAADEYRRLIAIHAGKPKGGLTECLKVDPDKVRRLSLSELQLEKAAETHGKEIVRFTQRNILRVYPKGTRITSTNYNPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFKANGGCGYVKKPDFLLKVGQNNEVFDPKAHLPVKTTLKVTIYMGEGWFHDFKHTHFDKFSPPDFYARVGIAGVPNDTVMKKTEKVEDNWSPSWNQVFEFPLAVPELALLRVEVHEYDMSEKDDFGGQTCLPVWELRSGIRAVPLYSRNGDKYANVKLLMRFEFI 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00251 1249 Gene3D C2 domain 1116 1249 IPR035892 -
Gma18g00251 1249 Gene3D C2 domain 424 557 IPR035892 -
Gma18g00251 1249 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 429 547 IPR035892 -
Gma18g00251 1249 Gene3D - 680 756 - -
Gma18g00251 1249 Gene3D - 23 100 - -
Gma18g00251 1249 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 259 547 - -
Gma18g00251 1249 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 4 259 - -
Gma18g00251 1249 SMART plcy_3 293 409 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma18g00251 1249 SMART plcy_3 984 1101 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma18g00251 1249 CDD PI-PLCc_plant 765 1088 - -
Gma18g00251 1249 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 104 248 - -
Gma18g00251 1249 Gene3D Phosphatidylinositol (PI) phosphodiesterase 763 1114 IPR017946 GO:0006629|GO:0008081
Gma18g00251 1249 CDD PI-PLCc_plant 103 396 - -
Gma18g00251 1249 Gene3D Phosphatidylinositol (PI) phosphodiesterase 101 422 IPR017946 GO:0006629|GO:0008081
Gma18g00251 1249 SUPERFAMILY EF-hand 681 768 IPR011992 -
Gma18g00251 1249 Pfam C2 domain 430 531 IPR000008 -
Gma18g00251 1249 Pfam C2 domain 1121 1223 IPR000008 -
Gma18g00251 1249 MobiDBLite consensus disorder prediction 254 272 - -
Gma18g00251 1249 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 668 1249 IPR001192 GO:0035556
Gma18g00251 1249 SUPERFAMILY PLC-like phosphodiesterases 104 410 IPR017946 GO:0006629|GO:0008081
Gma18g00251 1249 ProSiteProfiles C2 domain profile. 410 539 IPR000008 -
Gma18g00251 1249 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 322 408 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma18g00251 1249 CDD C2_PLC_like 427 549 - -
Gma18g00251 1249 ProSiteProfiles C2 domain profile. 1102 1231 IPR000008 -
Gma18g00251 1249 SUPERFAMILY PLC-like phosphodiesterases 766 1101 IPR017946 GO:0006629|GO:0008081
Gma18g00251 1249 PRINTS Phospholipase C signature 347 368 IPR001192 GO:0035556
Gma18g00251 1249 PRINTS Phospholipase C signature 232 249 IPR001192 GO:0035556
Gma18g00251 1249 PRINTS Phospholipase C signature 135 155 IPR001192 GO:0035556
Gma18g00251 1249 PRINTS Phospholipase C signature 109 127 IPR001192 GO:0035556
Gma18g00251 1249 PRINTS Phospholipase C signature 368 386 IPR001192 GO:0035556
Gma18g00251 1249 PRINTS Phospholipase C signature 523 533 IPR001192 GO:0035556
Gma18g00251 1249 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 259 547 IPR001192 GO:0035556
Gma18g00251 1249 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 4 259 IPR001192 GO:0035556
Gma18g00251 1249 MobiDBLite consensus disorder prediction 914 978 - -
Gma18g00251 1249 Pfam Phosphoinositide-specific phospholipase C, efhand-like 684 753 IPR015359 -
Gma18g00251 1249 SMART plcx_3 104 248 IPR000909 -
Gma18g00251 1249 SMART plcx_3 766 910 IPR000909 -
Gma18g00251 1249 MobiDBLite consensus disorder prediction 959 973 - -
Gma18g00251 1249 MobiDBLite consensus disorder prediction 254 292 - -
Gma18g00251 1249 SUPERFAMILY EF-hand 6 106 IPR011992 -
Gma18g00251 1249 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 766 910 - -
Gma18g00251 1249 Pfam Phosphatidylinositol-specific phospholipase C, X domain 106 248 IPR000909 -
Gma18g00251 1249 Pfam Phosphatidylinositol-specific phospholipase C, X domain 768 910 IPR000909 -
Gma18g00251 1249 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1121 1248 IPR035892 -
Gma18g00251 1249 CDD C2_PLC_like 1119 1248 - -
Gma18g00251 1249 Coils Coil 963 990 - -
Gma18g00251 1249 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 668 1249 - -
Gma18g00251 1249 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 1014 1100 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma18g00251 1249 SMART C2_3c 429 537 IPR000008 -
Gma18g00251 1249 SMART C2_3c 1121 1229 IPR000008 -
Gma18g00251 1249 MobiDBLite consensus disorder prediction 914 943 - -
Gma18g00251 1249 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 319 407 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma18g00251 1249 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 1013 1099 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00251 Gma-Chr18 2063492 2077475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00251 1 547 Acyl Lipid Metabolism Gene Families AT3G55940 54.922 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00251 K05857 - gmx:100784534 1131.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00251 18 2063492 2077475 Gma11g02322 11 38616601 38620929 ECH
Gma18g00251 18 2063492 2077475 Gma18g00251 18 2063492 2077475 ECH
Gma18g00251 18 2063492 2077475 Gma11g02321 11 38607628 38613563 GST
Gma18g00251 18 2063492 2077475 Gma14g00504 14 4810290 4815098 PCT
Gma18g00251 18 2063492 2077475 Gma02g02423 02 50309025 50312765 PCT
Gma14g00504 14 4810290 4815098 Gma18g00251 18 2063492 2077475 PCT
Gma02g02423 02 50309025 50312765 Gma18g00251 18 2063492 2077475 PCT