Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02321 ATGGCCAGTCACAACTACAAAGTCTTCAGCTGCTTCAACAGGAAGTTCACCGTCACCGAGCCGGGCCCACCGCCCGACGTAGAAAGAGCGTTTTCTGAATTCGCCGCCGGCGCCTCCTCCCTGTCCGGCGATCACATCCTCCGGTTTCTGGCGGAGCACCAGGGCGATGTGGACTGCACCGCAGCGGATTCGGAGCGGATGCTCCAGCAATCGCGGAAAGAGGATCGGGAAAGTGGAATGGATCTCCACGACTTCTTCCGTTTCCTGCTACATGACGATTTCAATAGCCCCATCAAATCTCAGGTACATCATGATATGAATGCTCCATTGTCACATTATTTCATATATACTGGGCACAATTCCTATCTTACTGGGAATCAACTGAGCAGTGACTGCAGTGATGTACCAATCATAAAGGCTTTGCAAGGAGGTGTAAGAGTAATTGAACTAGATTTATGGCCAAATTCAGACAAAGATGATATCGAAGTAGTTCATGGAAGGACTCTTACGACTCCTGTCTCACTCATCCAATGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTCACTACCCACTCATTATAACTTTAGAAGATCACCTTACTCCAGATCTTCAAGCTAAAGCTGCAGAGATGGCAACTCAAGTATTTGGAGAATTGCTTTATTATCCTCAGACAGATTCTCTGATGGAATTCCCCTCACCGGAATCATTGAAAGGTCGAATTCTTATATCAACAAAACCACCAAAAGAATTTCTTGAATCCAAAGAATGTGATGACAAGGACAACGAAAAGGAATCAGCCGACGAGAGTGCACCTGAGTACAAACGATTGATTACAATCCATGCTGGGAAACCAAAGGGTGATATTCAGGATGAATTAAAAGCTGCTGGTGCTGTTAGGCGCTTAAGCTTGAGTGAACAAGCACTTGAAAAGGCTTCTGAATCTTATGGAGCTGATATTGTTAGGTTTACGCAGAACAATATTCTCAGAGTATATCCAAAGGGAACACGTCTCAATTCCTCAAATTACAAGCCACACATAGGGTGGACATACGGAGCTCAGATGGTTGCGTTCAACATGCAGGGGTATGGAAAATCACTTCGGTACATGCAAGGAATGTTTAGAGCAAATGGAGGGTGCGGTTATGTGAAAAAGCCTGAATTTCTAATTGAAAAAGGTCCATATAATGAGGTTTTTGATCCTAAAAGAACATTGCCCGTGAAGAAAACATTAAAGGTAAAAGTCTATATGGGGACCGGTTGGAGCTTAGATTTCAGCCAAACAGACTTCGATACTTACTCACCACCCGACTTTTACGTTAAGGTTTGTATTGTTGGAGTTCCAGCTGATATGGCCAAGAAGAAAACATGTGTAATTTCAAATAACTGGTTTCCTGTCTGGGATGAACAGTTTGATTTCCCTTTGACTGTTCCAGAGCTGGCTTTGCTCCGCATAGAAGTTCGAGAGAATGACAAGAGTCAAAAGGATGACTTTGGTGGACAGACGTGTTTGCCTGTCTCAGAGCTAAAATCTGGATTCCGATCAGTCCCTCTGTATGATGAAAAGGGTGACAAATTAAAGTCTGTGAAGCTTCTAATGCGGTTTCAGTTTAGATGA 1623 0.435 MASHNYKVFSCFNRKFTVTEPGPPPDVERAFSEFAAGASSLSGDHILRFLAEHQGDVDCTAADSERMLQQSRKEDRESGMDLHDFFRFLLHDDFNSPIKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQGGVRVIELDLWPNSDKDDIEVVHGRTLTTPVSLIQCLKSIKEYAFVKSHYPLIITLEDHLTPDLQAKAAEMATQVFGELLYYPQTDSLMEFPSPESLKGRILISTKPPKEFLESKECDDKDNEKESADESAPEYKRLITIHAGKPKGDIQDELKAAGAVRRLSLSEQALEKASESYGADIVRFTQNNILRVYPKGTRLNSSNYKPHIGWTYGAQMVAFNMQGYGKSLRYMQGMFRANGGCGYVKKPEFLIEKGPYNEVFDPKRTLPVKKTLKVKVYMGTGWSLDFSQTDFDTYSPPDFYVKVCIVGVPADMAKKKTCVISNNWFPVWDEQFDFPLTVPELALLRIEVRENDKSQKDDFGGQTCLPVSELKSGFRSVPLYDEKGDKLKSVKLLMRFQFR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02321 540 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 2 539 - -
Gma11g02321 540 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 305 391 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma11g02321 540 PRINTS Phospholipase C signature 109 127 IPR001192 GO:0035556
Gma11g02321 540 PRINTS Phospholipase C signature 135 155 IPR001192 GO:0035556
Gma11g02321 540 PRINTS Phospholipase C signature 232 249 IPR001192 GO:0035556
Gma11g02321 540 PRINTS Phospholipase C signature 330 351 IPR001192 GO:0035556
Gma11g02321 540 PRINTS Phospholipase C signature 351 369 IPR001192 GO:0035556
Gma11g02321 540 PRINTS Phospholipase C signature 506 516 IPR001192 GO:0035556
Gma11g02321 540 CDD C2_PLC_like 410 540 - -
Gma11g02321 540 SUPERFAMILY EF-hand 6 106 IPR011992 -
Gma11g02321 540 SMART plcy_3 276 392 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma11g02321 540 SUPERFAMILY PLC-like phosphodiesterases 104 393 IPR017946 GO:0006629|GO:0008081
Gma11g02321 540 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 412 539 IPR035892 -
Gma11g02321 540 Pfam C2 domain 413 514 IPR000008 -
Gma11g02321 540 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 2 539 IPR001192 GO:0035556
Gma11g02321 540 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 104 248 - -
Gma11g02321 540 Gene3D Phosphatidylinositol (PI) phosphodiesterase 101 405 IPR017946 GO:0006629|GO:0008081
Gma11g02321 540 SMART plcx_3 104 248 IPR000909 -
Gma11g02321 540 Gene3D C2 domain 407 540 IPR035892 -
Gma11g02321 540 CDD PI-PLCc_plant 103 379 - -
Gma11g02321 540 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 302 390 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma11g02321 540 ProSiteProfiles C2 domain profile. 393 522 IPR000008 -
Gma11g02321 540 Gene3D - 23 100 - -
Gma11g02321 540 SMART C2_3c 412 520 IPR000008 -
Gma11g02321 540 Pfam Phosphatidylinositol-specific phospholipase C, X domain 106 248 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02321 Gma-Chr11 38607628 38613563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02321 2 539 Acyl Lipid Metabolism Gene Families AT2G40116 60.167 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02321 K05857 - gmx:100799027 1072.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00252 18 2078946 2083064 Gma11g02321 11 38607628 38613563 ECH
Gma11g02321 11 38607628 38613563 Gma11g02321 11 38607628 38613563 ECH
Gma18g00251 18 2063492 2077475 Gma11g02321 11 38607628 38613563 GST
Gma11g02321 11 38607628 38613563 Gma14g00504 14 4810290 4815098 PCT
Gma11g02321 11 38607628 38613563 Gma02g02423 02 50309025 50312765 PCT
Gma14g00504 14 4810290 4815098 Gma11g02321 11 38607628 38613563 PCT
Gma02g02423 02 50309025 50312765 Gma11g02321 11 38607628 38613563 PCT