Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02322 ATGTCTAGCAAACAGACTTATAGCTTCTGCTTCTGCTTCCGCCGGCGTTTCAGGATCCCCGTGTCGGAGGCCCCGCCGGAGATAAGGACCCTTTTCGACGGTTACTCCGATGAGAATGGCGTCATGACAGCCACTCACCTCCGAAGTTTTCTGGCTGAGGTGCAGAGGGAGGACAATGCCACTGAGGAGGAAGCACAAGCCATCATCGATGGTCACAAGCATCTCAGTATCTTCCACCGAAGTGGTCTCAATCTCGAGAGTTTCTTCAACTATCTTTTTAGTCACCATAATAACCCACCTCTCTTACCTTCTCTTGGGGTGCACCAAGATATGTCTTCACCGTTGTCTCATTACTTCATTTATACCGGTCATAATTCCTATCTAACTGGGAACCAGCTTAGCAGTGACTGCAGTGACGTCCCCATCATCAATGCACTGGAGAAGGGTGTAAGGGTGATTGAATTAGATATATGGCCTAATGAATCAAAGGATAATGTAGATGTTCTTCATGGAAGGACTTTGACTTCTCCTGTGGCACTCATCAAATGTCTGAGGTCTATTAAGCAGCATGCCTTTGTTGCCTCAGAATATCCAGTTGTAATAACCTTAGAAGACCATCTAACTCCCGACCTTCAGGCCAAAGTGGCTGAGATGATTACTCAAACATTTGGAGACATACTATTTGCTCCTACCTCAGAAAGCTTGAAGGAATTTCCTTCTCCTGAATCACTTAAAGGGAGGATTATTATATCAACCAAACCACCTAAGGAGTACCTTGAGGCAAAAGAAGTACAGGAAAAGGAGGAGGAATCACAACAGGAAAAGCCTGCAGATGATGAAGAAGCATGGGGGAAGGAAGTCCCTAGTTTGAGAGGTGGCACTATCTCTGATTACAAGAACATTGAGGATGATGATGTTCTTGATGATGAGGAAGATATTGATGAAGCAGAAAAGTCACGTCAGGATGCAGCGGACGAATACAGACGTTTAATTGCCATTCATGCTGGGAAGCCTAAAGGCGGATTAACGGAATGTCTCAAAGTGGATCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGCTACAGCTTGAAAAGGCTGCTGAAACTCATGGAAAAGAAATTGTCAGGTTCACTCAGCGGAATATACTGAGAGTGTATCCAAAAGGTACTCGCATTACTTCGACAAATTATAACCCATTGATTGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGGTATGGTAGATCTCTTTGGTTGATGCAGGGAATGTTCAAAGCCAATGGCGGATGCGGTTATGTTAAAAAACCAGATCTTCTATTAAAGGTTGGTCCAAATAATGAGGTCTTTGATCCTAGATCTCATTTGCCTGTGAAGACAACCCTGAAGGTGACTATATATATGGGGGAAGGATGGTTTCTTGATTTCAAACATACACACTTTGATAAATTCTCACCTCCGGACTTCTACGCAAGAGTGGGGATTGCTGGAGTCCCTAATGATACTGTTATGAAGAAAACCGAGAAAGTAGAGGATAATTGGTCACCTTCATGGAATCAAGTATTCAAGTTCCCACTTGCTGTTCCGGAACTTGCTCTGCTTCGTGTAGAAGTTCACGAGTATGACATGTCTGAGAAGGATGATTTTGGTGGCCAAACGTGCTTACCTGTGTGGGAACTAAGAAGTGGAATCCGAGCAGTTCCACTGTATTCCCGCAAAGGAGATAAGTATGCCAATGTGAAGCTTCTCATGCACTTTGAATTCATTTGA 1779 0.4401 MSSKQTYSFCFCFRRRFRIPVSEAPPEIRTLFDGYSDENGVMTATHLRSFLAEVQREDNATEEEAQAIIDGHKHLSIFHRSGLNLESFFNYLFSHHNNPPLLPSLGVHQDMSSPLSHYFIYTGHNSYLTGNQLSSDCSDVPIINALEKGVRVIELDIWPNESKDNVDVLHGRTLTSPVALIKCLRSIKQHAFVASEYPVVITLEDHLTPDLQAKVAEMITQTFGDILFAPTSESLKEFPSPESLKGRIIISTKPPKEYLEAKEVQEKEEESQQEKPADDEEAWGKEVPSLRGGTISDYKNIEDDDVLDDEEDIDEAEKSRQDAADEYRRLIAIHAGKPKGGLTECLKVDPDKVRRLSLSELQLEKAAETHGKEIVRFTQRNILRVYPKGTRITSTNYNPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFKANGGCGYVKKPDLLLKVGPNNEVFDPRSHLPVKTTLKVTIYMGEGWFLDFKHTHFDKFSPPDFYARVGIAGVPNDTVMKKTEKVEDNWSPSWNQVFKFPLAVPELALLRVEVHEYDMSEKDDFGGQTCLPVWELRSGIRAVPLYSRKGDKYANVKLLMHFEFI 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02322 592 Pfam Phosphoinositide-specific phospholipase C, efhand-like 27 96 IPR015359 -
Gma11g02322 592 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 592 - -
Gma11g02322 592 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 356 441 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma11g02322 592 SMART C2_3c 464 572 IPR000008 -
Gma11g02322 592 Pfam Phosphatidylinositol-specific phospholipase C, X domain 111 253 IPR000909 -
Gma11g02322 592 SMART plcy_3 327 444 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma11g02322 592 CDD PI-PLCc_plant 108 431 - -
Gma11g02322 592 Gene3D C2 domain 459 592 IPR035892 -
Gma11g02322 592 Gene3D Phosphatidylinositol (PI) phosphodiesterase 106 457 IPR017946 GO:0006629|GO:0008081
Gma11g02322 592 ProSiteProfiles C2 domain profile. 445 574 IPR000008 -
Gma11g02322 592 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 592 IPR001192 GO:0035556
Gma11g02322 592 SUPERFAMILY PLC-like phosphodiesterases 109 444 IPR017946 GO:0006629|GO:0008081
Gma11g02322 592 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 464 591 IPR035892 -
Gma11g02322 592 MobiDBLite consensus disorder prediction 262 286 - -
Gma11g02322 592 MobiDBLite consensus disorder prediction 302 316 - -
Gma11g02322 592 Coils Coil 306 333 - -
Gma11g02322 592 PRINTS Phospholipase C signature 114 132 IPR001192 GO:0035556
Gma11g02322 592 PRINTS Phospholipase C signature 140 160 IPR001192 GO:0035556
Gma11g02322 592 PRINTS Phospholipase C signature 237 254 IPR001192 GO:0035556
Gma11g02322 592 PRINTS Phospholipase C signature 382 403 IPR001192 GO:0035556
Gma11g02322 592 PRINTS Phospholipase C signature 403 421 IPR001192 GO:0035556
Gma11g02322 592 PRINTS Phospholipase C signature 558 568 IPR001192 GO:0035556
Gma11g02322 592 SUPERFAMILY EF-hand 24 111 IPR011992 -
Gma11g02322 592 Gene3D - 23 99 - -
Gma11g02322 592 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 109 253 - -
Gma11g02322 592 SMART plcx_3 109 253 IPR000909 -
Gma11g02322 592 Pfam C2 domain 465 566 IPR000008 -
Gma11g02322 592 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 357 443 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma11g02322 592 CDD C2_PLC_like 462 591 - -
Gma11g02322 592 MobiDBLite consensus disorder prediction 262 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02322 Gma-Chr11 38616601 38620929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02322 3 592 Acyl Lipid Metabolism Gene Families AT3G55940 68.235 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02322 K05857 - gmx:100784534 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00251 18 2063492 2077475 Gma11g02322 11 38616601 38620929 ECH
Gma11g02322 11 38616601 38620929 Gma11g02322 11 38616601 38620929 ECH
Gma11g02322 11 38616601 38620929 Gma14g00503 14 4800670 4805604 PCT
Gma11g02322 11 38616601 38620929 Gma02g02424 02 50317742 50334864 PCT
Gma14g00503 14 4800670 4805604 Gma11g02322 11 38616601 38620929 PCT
Gma02g02424 02 50317742 50334864 Gma11g02322 11 38616601 38620929 PCT