Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02423 ATGGGAAACAACATAGCAACATACAACAAATACAAAAGTTTATTGTTCTTTATCAGAAAGTACAAGTTCACCGAGCTGCTTCTGCGTGCCACCGAACTGCTTCCACCGCAGGACCTCAAGGAGGCGTTTTCAAAGTTCACTGGAGGAGGGTCCTACATGTCCGCGGAGCAGCTCCACGGTTTCCTGATGGAGCATCAGGGGCAAGTGAGAAAGACATGTCAAGAAACTGTTAATAAGGTTGATCAAAATAGAGAACATGAGATCACCCTTGATGAGCTCTTCCGTTTTTTGCTTCATGATGATTCCAACGCTCCCTTGAAAGCCGAGGTACATCATGATATGGGTGCTCCATTGTCACATTATTTCATATATACAGGCCATAACTCCTATTTGACAGGGAATCAACTCAGCAGTGACTGCAGTGAAGAACCAATCATAAAGGCTTTGAAAAGAGGCGTGCGTGTTATTGAACTTGATTTATGGCCAACTTACAATAAGCATGATATTAAAGTAGATCATGGATGGTACATGAATTTGATGATAAAGTCCATTTTAGATTTACTATTGACTATAACTCTTACCAACCCTGCCTCAGTTATTATATGTCTAGAATCCATAAAGGAATATGGTTTTGTTGCATCTCAATACCCAGTGATCATAACTATAGAAGACCATCTTACAACAGATCTTCGAGCTAAATTTGCAGAAATGGCAACTCAAATATTTGGGGAAATGCTTTTTTACCCTGGGGCAGATTGCTCTTGCTTAACAGAATTCCCTTCCCCGGAATCACTAAAAAATCGAGTTATTATATCAACGAAACCCCCGAAAGAACGTTTTAAGTCCAACCGTATCAAGGACAATCCTATGCTAAATGAAAGTGAATCATCTGAAGAAGAATCATGGGAAAATGAATCTCCAGACTCCGATAAGAACGAAGTGGAGACCGAGGACATGAATGGAAGTGATCATGAGGGAAATGAAAGTGCATGTGAATGTGCCCGCAAACCATATCAGGTGTGTTCACCTGATTACAAACACATAATCACTATCCATAATACGAAACTCAAGGGTTGCCTGAAGGATAAATTGAAAACAGACGGTGAAGTTAGACGCCTAAGTTGGAGTGAGAAGACCCTTGAAAAGGCTTCAGAATCTCATGGAACAGATATTCTTAGGTTCACACAGAAAAATATCCTCAGGGTTTACCCGAGTGCAATGCGTGTCAAATCCTCAAATTTCAAGCCAAATATTGGGTGGATGTACGGGGCTCAAATGGTTGCATGCAATATGCAGGGGCTTGGCAAATCGCTCTGGTTGATGCAGGGTATGTTCAGGGCAAATGGAGGCTGTGGTTATGTAAAGAAGCCTCAATTTCTAATGCAGAAGTATGACTGTGACAATGAGTTTGATCCTACAAGGATACAGTCAGTGAAGAAGAAGACATTTAAGGTAAAAGTATACATGGGACATGGGTGGAGCTCAGATTTGAGTCCTACACACTTTGATAAGTGCTCTCCGCCAGACTTCTACACTAAGGTTTGTATTGTTGGAATGCCAGATGATGTTGCAAAGAAGAAAACAAAGGTTATGATGGACAATTGGTTTCCTGTTTGGGATGAAGAATTTGAATTCTCTTTAATTGTTCCAGAGCTTGCATTGCTTCTCATACAAGTAAAGGACAAAGATCCTGGAAAGGATGATTTTGCTGGACAGACATGTTTGCCAGTTTCGGAGCTAAAACATGGATTTCATTCAGTCCCTTTATATAACAAAAAGGGAGAGAAATTTAAATCTGTAAAGCCATTGATGCAGTTTCAGTTTGAATGA 1830 0.4049 MGNNIATYNKYKSLLFFIRKYKFTELLLRATELLPPQDLKEAFSKFTGGGSYMSAEQLHGFLMEHQGQVRKTCQETVNKVDQNREHEITLDELFRFLLHDDSNAPLKAEVHHDMGAPLSHYFIYTGHNSYLTGNQLSSDCSEEPIIKALKRGVRVIELDLWPTYNKHDIKVDHGWYMNLMIKSILDLLLTITLTNPASVIICLESIKEYGFVASQYPVIITIEDHLTTDLRAKFAEMATQIFGEMLFYPGADCSCLTEFPSPESLKNRVIISTKPPKERFKSNRIKDNPMLNESESSEEESWENESPDSDKNEVETEDMNGSDHEGNESACECARKPYQVCSPDYKHIITIHNTKLKGCLKDKLKTDGEVRRLSWSEKTLEKASESHGTDILRFTQKNILRVYPSAMRVKSSNFKPNIGWMYGAQMVACNMQGLGKSLWLMQGMFRANGGCGYVKKPQFLMQKYDCDNEFDPTRIQSVKKKTFKVKVYMGHGWSSDLSPTHFDKCSPPDFYTKVCIVGMPDDVAKKKTKVMMDNWFPVWDEEFEFSLIVPELALLLIQVKDKDPGKDDFAGQTCLPVSELKHGFHSVPLYNKKGEKFKSVKPLMQFQFE 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02423 609 MobiDBLite consensus disorder prediction 307 329 - -
Gma02g02423 609 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 609 IPR001192 GO:0035556
Gma02g02423 609 SMART plcx_3 112 274 IPR000909 -
Gma02g02423 609 SUPERFAMILY PLC-like phosphodiesterases 112 462 IPR017946 GO:0006629|GO:0008081
Gma02g02423 609 Gene3D Phosphatidylinositol (PI) phosphodiesterase 109 474 IPR017946 GO:0006629|GO:0008081
Gma02g02423 609 Pfam C2 domain 485 583 IPR000008 -
Gma02g02423 609 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 482 607 IPR035892 -
Gma02g02423 609 SMART C2_3c 482 589 IPR000008 -
Gma02g02423 609 CDD C2_PLC_like 497 609 - -
Gma02g02423 609 Gene3D - 31 107 - -
Gma02g02423 609 PRINTS Phospholipase C signature 258 275 IPR001192 GO:0035556
Gma02g02423 609 PRINTS Phospholipase C signature 575 585 IPR001192 GO:0035556
Gma02g02423 609 PRINTS Phospholipase C signature 117 135 IPR001192 GO:0035556
Gma02g02423 609 PRINTS Phospholipase C signature 420 438 IPR001192 GO:0035556
Gma02g02423 609 PRINTS Phospholipase C signature 143 163 IPR001192 GO:0035556
Gma02g02423 609 PRINTS Phospholipase C signature 399 420 IPR001192 GO:0035556
Gma02g02423 609 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 374 460 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma02g02423 609 Pfam Phosphatidylinositol-specific phospholipase C, X domain 114 274 IPR000909 -
Gma02g02423 609 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 609 - -
Gma02g02423 609 Gene3D C2 domain 475 609 IPR035892 -
Gma02g02423 609 SUPERFAMILY EF-hand 23 114 IPR011992 -
Gma02g02423 609 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 369 459 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma02g02423 609 MobiDBLite consensus disorder prediction 280 329 - -
Gma02g02423 609 SMART plcy_3 345 461 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gma02g02423 609 ProSitePatterns EF-hand calcium-binding domain. 81 93 IPR018247 -
Gma02g02423 609 ProSiteProfiles C2 domain profile. 464 591 IPR000008 -
Gma02g02423 609 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 112 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02423 Gma-Chr2 50309025 50312765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02423 3 609 Acyl Lipid Metabolism Gene Families AT2G40116 51.343 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02423 K05857 - gmx:100776483 1194.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00504 14 4810290 4815098 Gma02g02423 02 50309025 50312765 GST
Gma18g00251 18 2063492 2077475 Gma02g02423 02 50309025 50312765 PCT
Gma11g02321 11 38607628 38613563 Gma02g02423 02 50309025 50312765 PCT
Gma02g02423 02 50309025 50312765 Gma18g00251 18 2063492 2077475 PCT
Gma02g02423 02 50309025 50312765 Gma11g02321 11 38607628 38613563 PCT