Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00143 ATGGACTTGGACTGTTATTGTTCTGGTTGGCTTGTTTTTAAATTAAGATTATTATGTTTACCCAACTCAAACTTGCATTTCCTGCAGATGTTTGATTATTGTGTTGTTGTGCAGCAGTATGCATTTGCATCTGAAGGTGTGAGTTTGGATGTGCAGGTATGTGACAAGGGCAAGTGGTTCGTCTCTTGCAAAGATGTTCCCATGTCTCGTAGAAATGTAGTTTTTCCCAGCATGTTTCCAAATGGTGGAAACTATCAGGATGTTGTTGATAGTAATTGTAATATCAGCAATGGAGATGATATTATTATAGATGATAATCCTGTGATGCATGAATTTACTGAGGAAGTTTCTGATTTCCCACTTGAGCGGTTCATGAGGTTACTGCCTCATGATCAGAATACCGGAGCTTTCTTTATAGCAGTATTGCAGAAAGTTTCTCCTCTGCCAGGTAATTTGTTATATGATTTCAGTTGTTTTTCTCTCTCAAACCCTGGCAAAGATAGTCAAGGAATTCTAGTAAAACCTAGAAAAGAAGTTGCTAAACATGTTAATCCATTGGAAAGTACACCTGAAGAAATTTCAGAGGCTAATATAAATGACAATGGACCTAATACAGATTTGAAAGTTAGTTCTGCTACATTTGAAGAAGTGGATTTCAAGGCAGCTCAAGATCCGTGCAATGTAGAAAACATAACAAAGAATACTCCAGGCAAAAGAAAACTGCAGATTCAAGGCAAATGGAGAGGCATTGACCCTGTTGTCTTCTTCAAAGATGAAGTAGTTATTAACAGCATAAAGGAATTTTATGCTATTGACGAGCAGTTTCCATTCAATGGTCACCTTGTAACTAGGAACAGTGATACAAGCCACATGAAAAGAATTTACTACATCTCCAAGTCAGTCAAAGATGTTCTGGAGTTGAACTTCTCAGTCGGACAGCAACTTAAAATAACTTCTGTTGGCCTGAAGATTTTTGAAAGACAAACGTCATGTGAAGGGAGAAGAGGTGCTGCATGGCCCCTCCAAGTGGATGAGTCAACAATAGCCATTGGCTGCTGGAAGGGTAGAGCAAGTTTGACTGTAATGGTTGGTGCATTGGAATGCCAAGAACTGCTCGAAAGGCTTATAATGCGTCTAGAAAAAGTAACAGAAAAGGACTCCTCCATGCATAAGAACAGACCGTCTGATAACAAGGGAGATGAAGCACAAGAATCAAACGGACCAGGAACAATAATCTTCTTGCCAGACAAAGATGCTGAGTTGTCATTTCCCTGA 1275 0.3922 MDLDCYCSGWLVFKLRLLCLPNSNLHFLQMFDYCVVVQQYAFASEGVSLDVQVCDKGKWFVSCKDVPMSRRNVVFPSMFPNGGNYQDVVDSNCNISNGDDIIIDDNPVMHEFTEEVSDFPLERFMRLLPHDQNTGAFFIAVLQKVSPLPGNLLYDFSCFSLSNPGKDSQGILVKPRKEVAKHVNPLESTPEEISEANINDNGPNTDLKVSSATFEEVDFKAAQDPCNVENITKNTPGKRKLQIQGKWRGIDPVVFFKDEVVINSIKEFYAIDEQFPFNGHLVTRNSDTSHMKRIYYISKSVKDVLELNFSVGQQLKITSVGLKIFERQTSCEGRRGAAWPLQVDESTIAIGCWKGRASLTVMVGALECQELLERLIMRLEKVTEKDSSMHKNRPSDNKGDEAQESNGPGTIIFLPDKDAELSFP 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00143 424 PANTHER TRNA (CYTOSINE(34)-C(5))-METHYLTRANSFERASE-RELATED 332 392 - -
Gma18g00143 424 Gene3D Vaccinia Virus protein VP39 87 240 IPR029063 -
Gma18g00143 424 PANTHER NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 51 335 IPR023267 GO:0001510
Gma18g00143 424 MobiDBLite consensus disorder prediction 384 400 - -
Gma18g00143 424 Coils Coil 365 385 - -
Gma18g00143 424 PANTHER TRNA (CYTOSINE(34)-C(5))-METHYLTRANSFERASE-RELATED 51 335 - -
Gma18g00143 424 MobiDBLite consensus disorder prediction 384 424 - -
Gma18g00143 424 PANTHER NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 332 392 IPR023267 GO:0001510
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00143 Gma-Chr18 1132537 1136806 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00143 K15334 - gmx:100808598 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00143 18 1132537 1136806 Gma11g02430 11 39655151 39661802 GST
Gma05g01746 05 39115025 39123137 Gma18g00143 18 1132537 1136806 PCT
Gma08g01233 08 10488099 10494987 Gma18g00143 18 1132537 1136806 PCT