Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02430 ATGGGGAGAGGAAAAAGAGGGAAGAGTCGCACTCAAAGAAAGCATTTCCAGCAGAACAGAGAGAATGTTTGGACATCTTCCAAACGCTCTAAATCAGATCCTTCCTCCGAAAATCCTATTCCTATCTGCAATCCCTACGCCACTCAAAACCTCGCTTTCGATCACTATTACAAGGAGCAGGGAATCGTTTCCTCAGAAGAATGGGATGCATTCGTGCAAGTTCTCAGAACTCCTTTGCCCGCAGCATTCAGAATCAATTCCACTAGCCGATTTTCTGCAGATATTCGGTCCCAACTGGAGAATGATTTTGTGCATTCTCTTCAGGCCGAGGTTGCGGAAGGGGAAGATACGGAGGCTATTATACCTTTGCCATGGTATCCCGAGAATCTTGCTTGGCATTCGAATTTCTCCCGTAAGCAGCTCAGGAAGAATCAAACACTTGGGAGGTTTCATGAATTCTTAAAGCTGGAAAATGAAATTGGAAATATTACAAGACAGGAAGTTGTCAGCATGGCACCTCCTCTGTTCTTGGATGTACATTCAAATCATTTTGTACTTGATATGTGTGCAGCACCAGGTTCAAAAACATTCCAATTGCTCGAGATTTTACACAAATTAACTAAAGCTGGATCTCTTCCTGATGGAATGGTTATAGCAAATGATCTAGATATCCAAAGATGCAATCTTCTCATTCACCAAACAAAACGGATGTGCACAGCCAACCTAATCGTCACCAATCACGAAGCTCAACACTTCCCAGGATGTCTTTTAAACAGGAACTATGATAAAATGGAGCCAGATCAGCAAGATCAGCTATTATTTGATCGTGTTCTGTGTGATGTCCCATGCAGCGGAGATGGCACCCTTCGAAAGGCACCTGATCTCTGGAGGAAATGGAACACAGGGACAGGGAATGGGCTTCATAACCTACAAGTTCTAATTGCTATGCGAGGTGTATCTTTACTTAAAGTTGGTGGAAAAATGATCTATTCAACCTGCTCAATGAATCCTATTGAGAATGAAGCTGTTGTTGCAGAGGTTTTGCGGAGGGGTGGAGGGTCCATTGAACTTGTAGATGTCTCTAGTGAGCTTCCCCAACTTATTCGCCGACCAGGTCTTAAGAGATGGAAGGTATGTGACAAGGGCAAGTGGTTTTTCTGTTGCAAAGATGTTCCCAAGCTTCGTAGAAATGTAGTTTTTCCCAGCATGTTTCCAAATGGTGGAAACTATAAGGATGATAGTGATTGTAATATCAGCATTGGAGATGATATTATTATAGATGATGTTTATGGAAATTCTGAAGATGATGTTCAAGCAGTGGAGAATCCTGTGATGCATGAATTTACTGAGGAAGTTTCTGATTTCCCACTAGAGCGGTGCATGAGGTTGGTGCCTCATGATCAGAATACCGGAGCCTTCTTTATTGCTGTATTGCAGAAAGTTTCTCCTCTGCCAGTTGCAGCAACTCAGGTAAAACCTAGAAAAGAAGTTGATAAACATGATGACACAGCAAACCAGGGCAATGAGGATGCACAAGAATTGCAGGTTAATCCATTGGAAAGTACACCTGAAGAAATTTCAGAGGCTAATATAAATGACAATAGACCCAAGACAGATTTGAAAGTTAGTTCTGTTACATGTGAAGAAGTGAATTTGAAGGAAGCCCAAGATCCCTGCAATGTGGAAAACATGACAAAGAATACTCCAGGCAAAAGAAAACTACAGATTCAAGGCAAATGGAGAGGCATTGACCCTGTAGTCTTCTTCAAAGATGAAGTAGTTATTAACAGCATAAAGGTATTTTATGGTATTGATGAGCAGTTTCCATTCAATGGTCACCTTGTAACAAGAAACAGTGATACAAGTCACGTGAAAAGAATTTACTATATCTCCAAGTCAGTCAAAGATGCTCTGGAGTTGAACTTCTCAGTTGGGCAGCAACTTAAAATAACTTCTGTTGGCCTGAAGATTTTTGAAAGACAGACATCATGTGAAGGAAGCAGAGCTGCTACAGGGCCCCTCCAAGTGGATGATTCAACAATAGCCATTGGATGCTGGAAGGGTAGAGCAAGTTTGACTATCATGGTTGGTGCATTGGAATGCCAAGAGCTGCTCGAAAGGCTTTTAATGTGTCTAGACACAGTAACAGAAAAGGACTCCTCCATGCATGATAACAAGGTAGATGAAGCACATGAATCAAACGGTAAAAATGAAGATGTTGAAATTACTGGTTGTTAA 2238 0.416 MGRGKRGKSRTQRKHFQQNRENVWTSSKRSKSDPSSENPIPICNPYATQNLAFDHYYKEQGIVSSEEWDAFVQVLRTPLPAAFRINSTSRFSADIRSQLENDFVHSLQAEVAEGEDTEAIIPLPWYPENLAWHSNFSRKQLRKNQTLGRFHEFLKLENEIGNITRQEVVSMAPPLFLDVHSNHFVLDMCAAPGSKTFQLLEILHKLTKAGSLPDGMVIANDLDIQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCLLNRNYDKMEPDQQDQLLFDRVLCDVPCSGDGTLRKAPDLWRKWNTGTGNGLHNLQVLIAMRGVSLLKVGGKMIYSTCSMNPIENEAVVAEVLRRGGGSIELVDVSSELPQLIRRPGLKRWKVCDKGKWFFCCKDVPKLRRNVVFPSMFPNGGNYKDDSDCNISIGDDIIIDDVYGNSEDDVQAVENPVMHEFTEEVSDFPLERCMRLVPHDQNTGAFFIAVLQKVSPLPVAATQVKPRKEVDKHDDTANQGNEDAQELQVNPLESTPEEISEANINDNRPKTDLKVSSVTCEEVNLKEAQDPCNVENMTKNTPGKRKLQIQGKWRGIDPVVFFKDEVVINSIKVFYGIDEQFPFNGHLVTRNSDTSHVKRIYYISKSVKDALELNFSVGQQLKITSVGLKIFERQTSCEGSRAATGPLQVDDSTIAIGCWKGRASLTIMVGALECQELLERLLMCLDTVTEKDSSMHDNKVDEAHESNGKNEDVEITGC 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02430 745 PRINTS RNA (C5-cytosine) methyltransferase signature 463 480 IPR023267 GO:0001510
Gma11g02430 745 PRINTS RNA (C5-cytosine) methyltransferase signature 325 341 IPR023267 GO:0001510
Gma11g02430 745 PRINTS RNA (C5-cytosine) methyltransferase signature 186 196 IPR023267 GO:0001510
Gma11g02430 745 PRINTS RNA (C5-cytosine) methyltransferase signature 275 287 IPR023267 GO:0001510
Gma11g02430 745 PANTHER NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 1 667 IPR023267 GO:0001510
Gma11g02430 745 PANTHER NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 665 725 IPR023267 GO:0001510
Gma11g02430 745 MobiDBLite consensus disorder prediction 721 738 - -
Gma11g02430 745 ProSitePatterns NOL1/NOP2/sun family signature. 274 285 IPR018314 GO:0003723|GO:0008168
Gma11g02430 745 PANTHER TRNA (CYTOSINE(34)-C(5))-METHYLTRANSFERASE-RELATED 665 725 - -
Gma11g02430 745 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 55 481 IPR029063 -
Gma11g02430 745 MobiDBLite consensus disorder prediction 492 507 - -
Gma11g02430 745 MobiDBLite consensus disorder prediction 1 42 - -
Gma11g02430 745 Gene3D Vaccinia Virus protein VP39 48 389 IPR029063 -
Gma11g02430 745 MobiDBLite consensus disorder prediction 721 745 - -
Gma11g02430 745 MobiDBLite consensus disorder prediction 489 537 - -
Gma11g02430 745 PANTHER TRNA (CYTOSINE(34)-C(5))-METHYLTRANSFERASE-RELATED 1 667 - -
Gma11g02430 745 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 71 481 IPR001678 GO:0008168
Gma11g02430 745 MobiDBLite consensus disorder prediction 508 529 - -
Gma11g02430 745 MobiDBLite consensus disorder prediction 18 42 - -
Gma11g02430 745 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 359 378 IPR023270 GO:0016428
Gma11g02430 745 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 648 660 IPR023270 GO:0016428
Gma11g02430 745 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 132 153 IPR023270 GO:0016428
Gma11g02430 745 Pfam 16S rRNA methyltransferase RsmB/F 176 351 IPR001678 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02430 Gma-Chr11 39655151 39661802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02430 K15334 - gmx:100808598 1347.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00143 18 1132537 1136806 Gma11g02430 11 39655151 39661802 GST
Gma05g01746 05 39115025 39123137 Gma11g02430 11 39655151 39661802 PCT
Gma08g01233 08 10488099 10494987 Gma11g02430 11 39655151 39661802 PCT