Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00062 ATGTCCTGCCGGAAAAGACAAAAGACTTCGCCGGACAAAACCTCCGACGACTTCTTCGACTCTCTCCCCGACGACCTTGTCCTCTCTATCCTCTGCAAGCTCAGCTCCACCGCAACTTCCCCCTCCGATTTCATTAGTGTCTTAATAACGTGCAAGAGACTAAACTCCTTAGGCCTTCACTCTCTTGTGTTATCAAAAGCTTCCCACAAAACATTCTCAGTCAAAGCCAAAAACTGGTGCGACTCTCTTCACCGTTTCCTCAAACATTGTGCAGATGCCGGAAACATTGAAGCCTGTTACACTCTCGGCATGATTCGGTTTTACTGCTTGCAAAACAGAGGGAGCGGCGCGTCGCTGATGGCGAAGGCGGCGATGAACTCTCACGCGCCGGCGCTGTACTCGCTCGCGGTGATACAGTTCAACGGAAGCGGCGGCACCAAAAACGACAAGGACCTTCGAGCGGGTGTGGCGCTTTGCGCACGCGCTGCGTTCCTCGGTCATATCGACGCGCTGCGTGAGCTTGGTCATTGCTTGCAAGACGGTTACGGCGTTAAGCTAAACGTAACGGAGGGACGACGGTTTTTGGTGCAAGCCAACGCTCGTGAACTCGCCGCCGTGCTCTCCGCGGGGAATACCAAGCGCCCCTGGCTGACCTGGAGCCACCACCCTGTCACCCACCCGCGGCTCCGGTCGGGTTGCCCGTTGATGAGTGATTACGGGTGCAACGTTCCGGCGCCGGATGCTCACCCGGCGAGTCAGTTTATGTCGGAGTGGTTTGATATCCGGGGCGGGTTTCCGGGTCCGGATATGAGGCTTTGTTCTCATTCGGGTTGCGGGCGACCCGAGACAAGGAGGCACGAGTTTCGAAGGTGTTCGGTTTGCGGTTTGGTGAATTATTGCTCACGCGCTTGTCAGGCGCTTGATTGGAAGTTCCGGCACAAGGCGGAATGTGCTACCGTTGAGAGGTGGCTCGATGACGACGGCGAAGGCGTCGCCGGTGAGAATGACGGCGGCGGAGATGACGGGGTAATGATGGTTAATAGTTAG 1047 0.5645 MSCRKRQKTSPDKTSDDFFDSLPDDLVLSILCKLSSTATSPSDFISVLITCKRLNSLGLHSLVLSKASHKTFSVKAKNWCDSLHRFLKHCADAGNIEACYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKLNVTEGRRFLVQANARELAAVLSAGNTKRPWLTWSHHPVTHPRLRSGCPLMSDYGCNVPAPDAHPASQFMSEWFDIRGGFPGPDMRLCSHSGCGRPETRRHEFRRCSVCGLVNYCSRACQALDWKFRHKAECATVERWLDDDGEGVAGENDGGGDDGVMMVNS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00062 348 SUPERFAMILY HIT/MYND zinc finger-like 272 322 - -
Gma18g00062 348 MobiDBLite consensus disorder prediction 328 348 - -
Gma18g00062 348 Pfam MYND finger 278 317 IPR002893 -
Gma18g00062 348 SUPERFAMILY HCP-like 84 198 - -
Gma18g00062 348 Gene3D - 267 322 - -
Gma18g00062 348 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 1 348 - -
Gma18g00062 348 SUPERFAMILY F-box domain 12 75 IPR036047 GO:0005515
Gma18g00062 348 Gene3D Tetratricopeptide repeat domain 66 214 IPR011990 GO:0005515
Gma18g00062 348 PANTHER MYND DOMAIN-CONTAINING 1 348 IPR044508 -
Gma18g00062 348 ProSiteProfiles Zinc finger MYND-type profile. 275 317 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00062 Gma-Chr18 503739 505536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00062 - - gmx:100797397 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00062 18 503739 505536 Gma18g00062 18 503739 505536 ECH
Gma18g00062 18 503739 505536 Gma11g02519 11 40326030 40327740 GST
Gma18g00062 18 503739 505536 Gma05g01485 05 36687199 36689009 PCT
Gma18g00062 18 503739 505536 Gma08g00970 08 8175907 8177578 PCT
Gma05g01485 05 36687199 36689009 Gma18g00062 18 503739 505536 PCT
Gma08g00970 08 8175907 8177578 Gma18g00062 18 503739 505536 PCT