Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02519 ATGCGAACGAGGAGACGCCTCTCTTATCTAAAAACCATGTCTTGCCGGAAAAGACAAAAGACTTCGCCGGACAAAACCTCCGATTGCTTCGACTCTCTCCCTGACGACCTCGTCCTCTCTATCCTCTGCAAGCTCAGCTCCACCGCCACCTCCCCCTCCGATTTCATCAGTGTCTTAATAACGTGCAAGAGACTAAACTCCTTAGGCCTTCACTCTCTTGTCTTATCAAAAGCTTCCCACAAAACATTCTCAGTCAAAGCCAAAAACTGGTGCGACTCTCTTCACCGTTTCCTCAAACATTGTGCCGACGCCGGAAACATTGAAGCCTGTTACACTCTCGGCTTGATTCGGTTTTATTGTTTGCAAAACAGAGGGAGCGGCGCGGCGCTGATGGCGAAGGCAGCGATGAACTCTCACGCGCCGGCGCTGTACTCGCTCGCGGTGATACAGTTCAACGGAAGCGGCGGCACGAAAAACGACAAGGACCTTCGAGCGGGTGTGGCGCTTTGCGCACGCGCGGCTTTCCTCGGTCACATCGACGCGCTTCGGGAGCTTGGTCATTGCCTTCAAGACGGTTACGGCGTTAAACAAAACGTAACGGAGGGTCGACGGTTTTTGGTGCAAGCCAACGTGCGTGAACTCGCCGCCGTGCTCTCCGCCGGGAATAACAAGCGTCCCTGGCTGACGTGGAGCCACCAACCTGTCCCCCACCCGAGGCTCCGGTCGGAAACCGGGTCGGGTTGTCCGCTGTTGAGTGATTACGGCTGCAACGTTCCGGCGCCGGAGGTTCACCCGGCGAGTCAGTTCATGTCGGAGTGGTTTGATATTCGGGGCGGGTTTCCGAGTGCGGGTATGAGACTCTGTTCTCAATCGGGTTGCGGGCGACCCGAGACAAGGAGGCACGAGTTTCGAAGGTGTTCGGTTTGTGGTGTGGTGAACTATTGCTCACGCGCGTGTCAGGCGCTTGATTGGAAGTTTCGGCACAAGGCGGAATGTGCTCCCGTTGAGAGGTGGCTCGATGACGACGACGAAGATGTCGCCGGCGAGAATGACGGCGGAGATGACGGAGTAATGATGGTTGATAGTTAG 1089 0.5601 MRTRRRLSYLKTMSCRKRQKTSPDKTSDCFDSLPDDLVLSILCKLSSTATSPSDFISVLITCKRLNSLGLHSLVLSKASHKTFSVKAKNWCDSLHRFLKHCADAGNIEACYTLGLIRFYCLQNRGSGAALMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVTEGRRFLVQANVRELAAVLSAGNNKRPWLTWSHQPVPHPRLRSETGSGCPLLSDYGCNVPAPEVHPASQFMSEWFDIRGGFPSAGMRLCSQSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLDDDDEDVAGENDGGDDGVMMVDS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02519 362 Pfam MYND finger 293 332 IPR002893 -
Gma11g02519 362 Gene3D - 280 336 - -
Gma11g02519 362 PANTHER MYND DOMAIN-CONTAINING 12 362 IPR044508 -
Gma11g02519 362 SUPERFAMILY F-box domain 19 86 IPR036047 GO:0005515
Gma11g02519 362 SUPERFAMILY HCP-like 96 209 - -
Gma11g02519 362 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 12 362 - -
Gma11g02519 362 Gene3D Tetratricopeptide repeat domain 76 224 IPR011990 GO:0005515
Gma11g02519 362 MobiDBLite consensus disorder prediction 343 362 - -
Gma11g02519 362 ProSiteProfiles Zinc finger MYND-type profile. 290 332 IPR002893 -
Gma11g02519 362 SUPERFAMILY HIT/MYND zinc finger-like 288 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02519 Gma-Chr11 40326030 40327740 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02519 - - gmx:100798136 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00062 18 503739 505536 Gma11g02519 11 40326030 40327740 GST
Gma11g02519 11 40326030 40327740 Gma05g01485 05 36687199 36689009 PCT
Gma11g02519 11 40326030 40327740 Gma08g00970 08 8175907 8177578 PCT
Gma05g01485 05 36687199 36689009 Gma11g02519 11 40326030 40327740 PCT
Gma08g00970 08 8175907 8177578 Gma11g02519 11 40326030 40327740 PCT