Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00970 ATGAGAACAAGGAGAGGTGCGTGTTATCCTGGTGTAGTCTCAAGGATGTGCTCCAATGTGAGGGTTACGAAGAAAAAAAGCAAGGATCTGCACATGCATATGCATGTTCCTGCCGGAGACTCCATTATTTATAGCCGGAAAAAGCAGAAGAAAACGCCGGAAAAACTCGCCGCCGGTCGTTACGATTTTTTCGAGTCCTTGCCGGATGACCTCGTAATCTCCATCTTCTGCAAGCTTAGTTCCACCGCCACTAAACCTTCCGATTTCGTCAATGTTTTAATCACgtctaaaagattaaacagattagcacttcattcgcttgtattatccaaagcctcgccgagaactttcactattaaaGCAAAATATTGGTGCGATTCGGCACACAAATTCCTCAAACACTGTGCCGATGCCGGAAACATTGAAGCTTGCTATACTTTAGGCATGATTCGGTTCTACTGTTTGCAAAACCGAGGGAGCGGCGCGTCGTTGATGGCGAAGGCGGCGATTAACTCTCACGCGCGGGCTCTCTACGCGCTGGCCGTGATTCAGTTCAACGGAAGCGGGGGCACGAAGAGCGACAAGGACCTACGCGCCGGCGTGGCGCTATGCGCAAGAGCGGCGTTTCTCGGACACGTCGACGCGCTGCGCGAGCTCGGCCACTGCCTACAGGACGGTTACGGCGTACGGCAGAACATCGCCGAGGGACGGCGGTTCCTCGTGCAGGCCAACGCGCGTGAGCTCGCCGCCGTGCTGTCCACCGGCGCCGCCGCGCGTACCTTGCTGAGTTGGAATCTTCAGCCGCAGCAGCTCCGGCAGGGGTCCGGGTGTCCGCTTCTCAGCGATTTCGGATGCAACGTGCCGGCGCCGGATGTGCATCCGGCGAGCCTGTTCATGACTGAGTGGTTCGCCGCTCACGGCGGTTCTCCGGGACCGGGGCTGAGACTCTGTTCTAACGCGGGGTGCGGGAGGCCCGAGACGAGGAAGCACGAGTTTCGAAGGTGTTCTGTGTGCGGCGAGGTGAATTATTGCTCACGCGCGTGCCAAGCGCTTGATTGGAAGTTCCGGCACAAAGCGGAGTGCGCCCCCGTGGAGCGATGGCTCGACGAGGACGGCGAAGATGTCGGTAACGACGACGGTGACGGAGAGGTCGAGGTTGTTATGGTAGATAGTTAG 1176 0.5425 MRTRRGACYPGVVSRMCSNVRVTKKKSKDLHMHMHVPAGDSIIYSRKKQKKTPEKLAAGRYDFFESLPDDLVISIFCKLSSTATKPSDFVNVLITSKRLNRLALHSLVLSKASPRTFTIKAKYWCDSAHKFLKHCADAGNIEACYTLGMIRFYCLQNRGSGASLMAKAAINSHARALYALAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNIAEGRRFLVQANARELAAVLSTGAAARTLLSWNLQPQQLRQGSGCPLLSDFGCNVPAPDVHPASLFMTEWFAAHGGSPGPGLRLCSNAGCGRPETRKHEFRRCSVCGEVNYCSRACQALDWKFRHKAECAPVERWLDEDGEDVGNDDGDGEVEVVMVDS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00970 391 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 44 391 - -
Gma08g00970 391 SUPERFAMILY HIT/MYND zinc finger-like 317 366 - -
Gma08g00970 391 PANTHER MYND DOMAIN-CONTAINING 44 391 IPR044508 -
Gma08g00970 391 Pfam MYND finger 320 361 IPR002893 -
Gma08g00970 391 Gene3D Tetratricopeptide repeat domain 103 275 IPR011990 GO:0005515
Gma08g00970 391 ProSiteProfiles Zinc finger MYND-type profile. 319 361 IPR002893 -
Gma08g00970 391 SUPERFAMILY F-box domain 54 120 IPR036047 GO:0005515
Gma08g00970 391 SUPERFAMILY HCP-like 126 243 - -
Gma08g00970 391 Gene3D - 313 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00970 Gma-Chr8 8175907 8177578 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00970 - - gmx:100819013 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00970 08 8175907 8177578 Gma08g00970 08 8175907 8177578 ECH
Gma05g01485 05 36687199 36689009 Gma08g00970 08 8175907 8177578 GST
Gma18g00062 18 503739 505536 Gma08g00970 08 8175907 8177578 PCT
Gma11g02519 11 40326030 40327740 Gma08g00970 08 8175907 8177578 PCT
Gma08g00970 08 8175907 8177578 Gma18g00062 18 503739 505536 PCT
Gma08g00970 08 8175907 8177578 Gma11g02519 11 40326030 40327740 PCT