Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01485 ATGAGAACAAGGAGAGGAGCGTGTTACTCTGGAGTAGTCTCAAGGATGTGTTCCGATGCGAGGGTTTCCAAGAAAAAAAACAAGGATCTGCACATGCACATGCATATGCATATGCATGTCCCCGCCGGAGACTCCATTATTTACAGCCGGAAAAGGCAGAAGAAAACGCCGGAGAAAACCGCCGGCGCTGATTACGAATTTTTCGAGTCTTTGCCGGACGACCTCGTAATCTCCATCTTCTGCAAACTTAGTTCCACCGCCACTAAACCTTCCGATTTCGTCAATATTTTAATCACGTGCAAAAGATTAAACAGATTAGCACTTCATTCGCTTGTATTATCCAaAGCCTCGCCGAAAACTTTCACTATTAAAGCAAGAGATTGGTGCGATTCGGCACACAAATTCCTCAAACACTGTGCCGATGCCGGAAACGTTGAAGCTTGCTATACTTTAGGCATGATTCGGTTCTACTGTTTGCAAAACCGAGGGAGCGGCGCGTCGTTTATGGCGAAGGCGGCCATTAACTCTCACGCGCGGGCTCTGTATGCGCTGGCCGTGATTCAGTTCAACGGCAGCGGTGGCACGAAGAGCGACAAGGACCTACGCGCCGGCGTGGCGCTGTGCGCCAGAGCGGCGTTTCTTGGCCACGTCGATGCGATGCGCGAACTCGGCCACTGCCTGCAGGACGGTTACGGCGTGCGGCAGAACATCGCCGAGGGACGGCGGTTCCTCGTGCAGGCAAACGCGCGCGAGCTCGCCGCCGTGCTGTCTACCGGCGCCGCCGCGCGCACCTGGCTGAGTTGGAATCTTCAGCCGCAGCAGCTCCGGCAGGGGTCCGGGTGTCCGCTTCTCAGCGATTTCGGATGCAACGTACCGGCGCCGGAGGTGCACCCCGCGAGCCTGTTCATGGCGGAGTGGTTCGCCGCGCGGGGCGGTTCGCCGGGACCGGGGCTGAGACTCTGTTCTCACGCGGGGTGCGGGAGGCCCGAGACGAGGAAGCACGAGTTTCGAAGGTGTTCTGTGTGCGGCGTGGTGAATTATTGCTCACGCGCGTGCCAAGCGCTTGATTGGAAGTTCCGGCACAAGGCGGAGTGCTCCCCCGTGCAACGGTGGCTCGAGGAGGACGGCGAAGATGTCGGTAACGACGACGGTGACGGAGAGGTGGAGGTTATGGTAGATAGTTAG 1185 0.5747 MRTRRGACYSGVVSRMCSDARVSKKKNKDLHMHMHMHMHVPAGDSIIYSRKRQKKTPEKTAGADYEFFESLPDDLVISIFCKLSSTATKPSDFVNILITCKRLNRLALHSLVLSKASPKTFTIKARDWCDSAHKFLKHCADAGNVEACYTLGMIRFYCLQNRGSGASFMAKAAINSHARALYALAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDAMRELGHCLQDGYGVRQNIAEGRRFLVQANARELAAVLSTGAAARTWLSWNLQPQQLRQGSGCPLLSDFGCNVPAPEVHPASLFMAEWFAARGGSPGPGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKFRHKAECSPVQRWLEEDGEDVGNDDGDGEVEVMVDS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01485 394 SUPERFAMILY HCP-like 129 247 - -
Gma05g01485 394 MobiDBLite consensus disorder prediction 375 394 - -
Gma05g01485 394 Gene3D - 320 372 - -
Gma05g01485 394 Gene3D Tetratricopeptide repeat domain 106 279 IPR011990 GO:0005515
Gma05g01485 394 MobiDBLite consensus disorder prediction 376 394 - -
Gma05g01485 394 Pfam MYND finger 325 365 IPR002893 -
Gma05g01485 394 ProSiteProfiles Zinc finger MYND-type profile. 323 365 IPR002893 -
Gma05g01485 394 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 48 392 - -
Gma05g01485 394 SUPERFAMILY F-box domain 55 124 IPR036047 GO:0005515
Gma05g01485 394 PANTHER MYND DOMAIN-CONTAINING 48 392 IPR044508 -
Gma05g01485 394 SUPERFAMILY HIT/MYND zinc finger-like 320 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01485 Gma-Chr5 36687199 36689009 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01485 - - gmx:100798174 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01485 05 36687199 36689009 Gma08g00970 08 8175907 8177578 GST
Gma18g00062 18 503739 505536 Gma05g01485 05 36687199 36689009 PCT
Gma11g02519 11 40326030 40327740 Gma05g01485 05 36687199 36689009 PCT
Gma05g01485 05 36687199 36689009 Gma18g00062 18 503739 505536 PCT
Gma05g01485 05 36687199 36689009 Gma11g02519 11 40326030 40327740 PCT