Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00052 ATGACAGCTAGAAAGTCTGGCAGTTTCAGGATGTCAGATCCTGTAAAGCCTCCACCTTCTAAGAAGTCTCGAAGAGACAGAAGCAGGGGCAAATCATCTGGAAGATCTTGCACAACTGAAGTTATGGAACAAGAAATTTGGAAAGATTTTCCTGAAGATTTATTTGAGGCTGTGATTGCACGACTTCCCATTGCCACATTTTTCCGCTTCCGCTCTGTCTGCCGGCAGTGGAATTCCATGCTGACTTCTCAAAGTTTTTCTCTGCATTGTACTCAAGTCACACAAGAAAGCCCATGGTTTTACACCATTACCCATGAAAATGTGAATTCGGGAGCCATGTATGACCCTTCATTGAAAAAATGGCATCACCCAACTATATCAACACCGCCCACAAAATTGATTGTTTTACCCGTGGCTTCTGCTGGCGGTTTAGTTTGCTTCCTTGACATTGGTCATCGAAACTTCTTTGTTTGTAACCCACTGACTCAATCCTTCAAGGAGTTGCCAGTTCGATCAGTTAAGGTCTGGTCTCGTGTTGCTGTAGGGATGACTACAAATGGAAACTCTGTTGGTTCAGGCTACAAGATCTTATGGGTGGGTTGTGATGGAGAATATGAAGTATACGACTCAGTCAGAAATTCTTGGAGTCGTCCGGGAAACATGCCTGCGGGTATGAAGCTGCCATTGTCAATCAACTTTAGGTCTCAAGCTGTCTCTATTGGCAGCACACTTTACTTCATGCGTTCAGACCCAGAAGGGATTGTTTCCTATGATATGGCAACTGGGGTTTGGAAACAATATATAATCCCAGCGCCATTGCATCTGACTGATCACACTCTGGCTGAGTGTGATGGCCAGATCATGCTCGTGGGTTTGCTCACGAAGAATGCAGCCACTTGTGTATGCATATGGGAGTTGCAGAAAATGACTCTCTTGTGGAAGGAGGTTGACAGAATGCCAAACATATGGTGCTTGGACTTTTATGGGAAGCACGTTAGAATGACTTGCCTGGGGAACAAAGGCTTGCTCATGTTGTCCTTGAGATCAAAACAAATGAACCGATTGGTTACTTACAACATAGCAAAGAAAGAATGGCTGAAGGTTCCTGGGTGTGTGGTGCCACGTGGGAGAAAACGACAGTGGATAGCATGTGGTACTGCATTTCATCCATGCCTGACTGCGGTGGCATGA 1191 0.4517 MTARKSGSFRMSDPVKPPPSKKSRRDRSRGKSSGRSCTTEVMEQEIWKDFPEDLFEAVIARLPIATFFRFRSVCRQWNSMLTSQSFSLHCTQVTQESPWFYTITHENVNSGAMYDPSLKKWHHPTISTPPTKLIVLPVASAGGLVCFLDIGHRNFFVCNPLTQSFKELPVRSVKVWSRVAVGMTTNGNSVGSGYKILWVGCDGEYEVYDSVRNSWSRPGNMPAGMKLPLSINFRSQAVSIGSTLYFMRSDPEGIVSYDMATGVWKQYIIPAPLHLTDHTLAECDGQIMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIAKKEWLKVPGCVVPRGRKRQWIACGTAFHPCLTAVA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00052 396 SUPERFAMILY F-box domain 42 120 IPR036047 GO:0005515
Gma18g00052 396 SUPERFAMILY Galactose oxidase, central domain 111 377 IPR011043 -
Gma18g00052 396 Pfam F-box domain 47 86 IPR001810 GO:0005515
Gma18g00052 396 PANTHER BNAA07G08860D PROTEIN 20 395 - -
Gma18g00052 396 PANTHER F-BOX/KELCH-REPEAT PROTEIN 20 395 - -
Gma18g00052 396 Gene3D - 47 86 - -
Gma18g00052 396 MobiDBLite consensus disorder prediction 1 38 - -
Gma18g00052 396 Gene3D - 101 383 IPR015915 GO:0005515
Gma18g00052 396 SMART fbox_2 50 90 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00052 Gma-Chr18 426136 430925 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00052 - - gmx:100810179 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00052 18 426136 430925 Gma18g00052 18 426136 430925 ECH
Gma18g00052 18 426136 430925 Gma11g02528 11 40407416 40412212 GST
Gma18g00052 18 426136 430925 Gma05g01489 05 36774528 36778309 PCT
Gma18g00052 18 426136 430925 Gma08g00974 08 8221938 8225816 PCT
Gma05g01489 05 36774528 36778309 Gma18g00052 18 426136 430925 PCT
Gma08g00974 08 8221938 8225816 Gma18g00052 18 426136 430925 PCT