Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01489 ATGGAAGAAGAAGAAGGGCTTGCCATGCTCATCACTCACCTTCACCTTCACCTTCACCATTTCTCTCACTCTCTTTCTCCTCCTTTTACCCTTCACCCTCCAGTCTCTCATCAACTCCCCAGATTCTCCTTCTTTGACATTGATGATTACTCCGTAGATGACTTCTGTGGCCTTGTAATGGCAGCTGGAAAGTCTGGAAGTTCCAGGATGATGGAACCTCTAAAGCATCCATCTAAGAAGTCTCGAAGAGATAGGAGCTGTGGAAAATCATCTGGAAGGTCCTCCAGGGATGAAGCTATGGAACAACAAATTTGGAAAAATTTGCCTGAGGATCTATTTGAGCCTGTGATTGCACGACTTCCCATTGCCACATTTTTCCGCTTCCGCTCTGTATGCCAGCGATGGAATTCCTTGCTGTCTTCTCAAAGTTTTTCTCTGCATTGTGCTCAAGTCAAACAAGCAAACCCATGGTTTTACACTGTAACTCATGAACATGCAAATTCTGGAGCCATGTATGACCCTTCTATGAAGAAGTGGTACCATCCCACTATATCAACACTGCCCGCAGAGTTGATAGTTTTACCAGTGGCTTCTGCAGGGGGTCTAGTTTGCTTTCTTGACATTTATCATCAAAATTTCTATGTTTGTAACCCATTGATTCAATCCTTAAAGGAGTTACCAGCTCGGTCAGTTAGGGTTTGGGCTCGTGATGCTGTAGGAATGACAGTAAATGGGAACTCAACTGGTGCTGGCTACAAGATCCTATTGGTGGGTTGTGATGGAGAATATGAAATTTATGACTCCCTAACAAAGTCTTGGAGCCATCCAGAAAAAATGCCTTCAGATATTAAGCTGCCGCTGTCACTCAATTTTAGGTCACACGCTGTTTCTATTAACAGCACCCTGTACTTCATGCATTCAGATCCCAAAGGGATTGTTTCGTATGATATGGCAACTGGGGTTTGGACACAGTACATAATCCCAGCGCCATTGCATCTGACTGACCACATGCTGGCCGAGTGCGATGGCCGGCTATTGCTTGTTGGGCTGCTCACGAAGAATGCAGCCACATGCATATGCATATGGGAGCTGCAGAAGATGACTTTCTTGTGGAAGGAGGTTGACAGAATGCCAAACGTCTGGTGCTTGGACTTTTATGGGAAGCACGTTAGAATGACTTGCTTGGGAAACAAAGACTTGCTCATGTTATCCTTGAGATCAAGACAAATGAATCGATTGGTTACTTACAACATAGCAAGTAGGGAATGGGTGAAAGTTCCTTGGTGTCTGGTGCCACATGGAAGAAAACGGCAATGGATAGCACATGGTACTGCATTTTATCCATGCCTCTCTGCAATGGCCTGA 1365 0.4491 MEEEEGLAMLITHLHLHLHHFSHSLSPPFTLHPPVSHQLPRFSFFDIDDYSVDDFCGLVMAAGKSGSSRMMEPLKHPSKKSRRDRSCGKSSGRSSRDEAMEQQIWKNLPEDLFEPVIARLPIATFFRFRSVCQRWNSLLSSQSFSLHCAQVKQANPWFYTVTHEHANSGAMYDPSMKKWYHPTISTLPAELIVLPVASAGGLVCFLDIYHQNFYVCNPLIQSLKELPARSVRVWARDAVGMTVNGNSTGAGYKILLVGCDGEYEIYDSLTKSWSHPEKMPSDIKLPLSLNFRSHAVSINSTLYFMHSDPKGIVSYDMATGVWTQYIIPAPLHLTDHMLAECDGRLLLVGLLTKNAATCICIWELQKMTFLWKEVDRMPNVWCLDFYGKHVRMTCLGNKDLLMLSLRSRQMNRLVTYNIASREWVKVPWCLVPHGRKRQWIAHGTAFYPCLSAMA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01489 454 MobiDBLite consensus disorder prediction 68 100 - -
Gma05g01489 454 ProSiteProfiles F-box domain profile. 102 147 IPR001810 GO:0005515
Gma05g01489 454 PANTHER F-BOX/KELCH-REPEAT PROTEIN 40 453 - -
Gma05g01489 454 Gene3D - 105 142 - -
Gma05g01489 454 PANTHER BNAA07G08860D PROTEIN 40 453 - -
Gma05g01489 454 Gene3D - 143 443 IPR015915 GO:0005515
Gma05g01489 454 SMART fbox_2 108 148 IPR001810 GO:0005515
Gma05g01489 454 SUPERFAMILY F-box domain 99 181 IPR036047 GO:0005515
Gma05g01489 454 Pfam F-box domain 105 144 IPR001810 GO:0005515
Gma05g01489 454 SUPERFAMILY Galactose oxidase, central domain 169 435 IPR011043 -
Gma05g01489 454 MobiDBLite consensus disorder prediction 73 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01489 Gma-Chr5 36774528 36778309 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01489 - - gmx:100800464 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01489 05 36774528 36778309 Gma08g00974 08 8221938 8225816 GST
Gma18g00052 18 426136 430925 Gma05g01489 05 36774528 36778309 PCT
Gma11g02528 11 40407416 40412212 Gma05g01489 05 36774528 36778309 PCT
Gma05g01489 05 36774528 36778309 Gma18g00052 18 426136 430925 PCT
Gma05g01489 05 36774528 36778309 Gma11g02528 11 40407416 40412212 PCT