Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00974 ATGGAAGAAGAAGAAGAAGGGCTTGCCATGCTCATCACTCACCTTCACCATTTCTCTCACTCTCTTTCTCCTCTCTTTTTTACCCTTCACCCTCCTCTACTCTCTCATCAACTCCCCAGATTGTCCTTCTTTGACATTGATGATTACTCCTTAGATGACTTCTGTGGCCTTGTAATGGCAGCTGGAAAGTCTGGAAGTTCCAGGATGTTGGAGCCTCTAAAGCATCCATCTAAGAAGTCTCGAAGAGATAGGAGCCTTGGAAAATCATCTGGAAGGTCCTCCAGGGATGAAGCTATGGAACAACAAATTTGGAAAAAATTGCCTGAGGATCTATTTGAGCCTGTGATTGCACGACTTCCCATTGCCACATTTTTCTGCTTCCGCTCTGTATGCCAGCGATGGAATTCCTTGCTGACTTCTCAAAGTTTTTCTCAGCATTGTGCTCAAGTCCCACAAGCAAACCCATGGTTTTACACCGTAACTCATGAACATGCAAATTCCGGAGCCATGTATGACCCTTCTATGAAGAAGTGGTATCATCCCACTATATCAACACTGCCCGCAGAGTTGATAGTTTTGCCAGTGGCTTCTGCAGGGGGTCTAGTTTGCTTTCTTGACATTTATCGTCAAAATTTCTATGTTTGTAACCCATTGACTCAATCCTTAAAGGAGTTACCAGCTCGTTCAGTTAGGGTTGGGTCTCGTGCGTCTGTAGGGATGACAGTAAATGGAAACTCAACTAGTGCTGGCTACAAGATCCTATTAGTTGGTTGTGATGGAGAATATGAAATTTATGACTCAGTGACAAAGTCTTGGAGCCATCCAGAAAACATGCCTGCAGATATTAAGCTCCCGCTGTCACTCAATTTTAGGTCACAGGCCGTTTCTATTGACAGCACCCTGTACTTCATGCATTCAGATCCCGAAGGGATTGTTTTGTATGATATGGCAACTGGGGTTTGGACGCAGTACATAATCCCAGCACCATTGCATCTGACTGACCACATGCTGGCTGAGTGCGATGGCCGGATATTGCTTGTGGGGTTGCTCACGAAGAATGCAGCCACATGTATATGCATATGGGAGCTGCAGAAGATGACTTTCTTGTGGAAGGAGGTTGACAGAATGCCAAACGTCTGGTGCTTGGACTTTTATGGGAAGCACGTTAGAATGACTTGCTTGGGAAACAAAGGCTTGCTGATGTTATCCTTGAGATCAAGACAAATGAATCGATTGGTTACTTACAACATAGCAAGTAGGGAATGGGTGAAGGTTCCTGCGTGTCTGGTGCCACATGGAAGAAAACGACAATGGGTAGCACATGGTACTGCATTTTATCCATGCCTCACTGCAATGGCTTGA 1362 0.4508 MEEEEEGLAMLITHLHHFSHSLSPLFFTLHPPLLSHQLPRLSFFDIDDYSLDDFCGLVMAAGKSGSSRMLEPLKHPSKKSRRDRSLGKSSGRSSRDEAMEQQIWKKLPEDLFEPVIARLPIATFFCFRSVCQRWNSLLTSQSFSQHCAQVPQANPWFYTVTHEHANSGAMYDPSMKKWYHPTISTLPAELIVLPVASAGGLVCFLDIYRQNFYVCNPLTQSLKELPARSVRVGSRASVGMTVNGNSTSAGYKILLVGCDGEYEIYDSVTKSWSHPENMPADIKLPLSLNFRSQAVSIDSTLYFMHSDPEGIVLYDMATGVWTQYIIPAPLHLTDHMLAECDGRILLVGLLTKNAATCICIWELQKMTFLWKEVDRMPNVWCLDFYGKHVRMTCLGNKGLLMLSLRSRQMNRLVTYNIASREWVKVPACLVPHGRKRQWVAHGTAFYPCLTAMA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00974 453 SUPERFAMILY F-box domain 92 149 IPR036047 GO:0005515
Gma08g00974 453 SUPERFAMILY Galactose oxidase, central domain 129 434 IPR011043 -
Gma08g00974 453 Gene3D - 142 443 IPR015915 GO:0005515
Gma08g00974 453 PANTHER BNAA07G08860D PROTEIN 40 453 - -
Gma08g00974 453 Pfam F-box domain 104 143 IPR001810 GO:0005515
Gma08g00974 453 MobiDBLite consensus disorder prediction 72 99 - -
Gma08g00974 453 PANTHER F-BOX/KELCH-REPEAT PROTEIN 40 453 - -
Gma08g00974 453 MobiDBLite consensus disorder prediction 67 99 - -
Gma08g00974 453 SMART fbox_2 107 147 IPR001810 GO:0005515
Gma08g00974 453 Gene3D - 104 141 - -
Gma08g00974 453 ProSiteProfiles F-box domain profile. 101 146 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00974 Gma-Chr8 8221938 8225816 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00974 - - gmx:100775721 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00974 08 8221938 8225816 Gma08g00974 08 8221938 8225816 ECH
Gma05g01489 05 36774528 36778309 Gma08g00974 08 8221938 8225816 GST
Gma18g00052 18 426136 430925 Gma08g00974 08 8221938 8225816 PCT
Gma11g02528 11 40407416 40412212 Gma08g00974 08 8221938 8225816 PCT
Gma08g00974 08 8221938 8225816 Gma18g00052 18 426136 430925 PCT
Gma08g00974 08 8221938 8225816 Gma11g02528 11 40407416 40412212 PCT