Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02528 ATGGAAGGGCTGGCCATGCTGAAGCAGCTCATTGCGCAGCTTCAACACCTCTTTGACACTTACCACTCTCAATCTTCTCTCATCTTTCAACAAcAACACCCCAGATGGACGACCTCCCTTGACATTGAAGATAACTCTGTAGATGACTTCTGTGGCCTTGTAATGACAGCTGGAAAGTCTGGCAGTTTCAGGATGTCGGAGCCTGGAAAGCCTCCACCTACTAAGAAGTCTCGAAGAGATAGAAGCAGGGGCAAATCATCTGGAAGATCTTGTACAACTGAAGTTATGGAACAAGAAATTTGGAAAGATTTTCCTGAAGATTTATTTGAGGCTGTGATTGCACGTCTTCCCATTTCCACATTTTTCCGCTTCCGTTCTGTCTGCCGGCAGTGGAATTCCATGCTGAATTCTCAAAGTTTTTCTCAGCATTGTACTCAAGTCACACAAGAAAATCCATGGTTTTACACCATTACCCATGAAAATGTGAATTCGGGAGCCATGTACGACCCTTCTTTGAAAAAATGGCATCATCCAACTATATCAACACCGCCCACAAAATTGATTGTTTTACCTGTGGCTTCTTCTGGCGGCTTAGTTTGCTTTCTTGACATTGGTCATCGAAACTTCTTTGTTTGTAACCCACTGACTCAATCCTTCAAGGAGTTGCCAGCTCGATCAGTCAAGGTCTGGTCTCGTGTTGCTGTAGGGATGATGGCAAATGGAAACTTTGCTGGTTCAGGCTACAAGATCGTATGGGTAGGTTGTGATGGAGAATATGAAGTATACGACTCAGTCAGAAATTCTTGGAGTCGTCCAGGAAACATGCCTGTGGGCATGAAGCTGCCATTGTCGCTCAACTTTAGGTCTCAAGCTGTCTCTATTGGCAGCACACTTTATTTCATGCGTTCAGACCCAGACGGGATTGTTTCCTATGATATGGCAACTGGGGTTTGGAAACAATATATAATCCCAGCGCCACTGCATCTGACTGATCACACTCTGGCTGAGTGTGATGGCCAGGTCATGCTTGTGGGTTTGCTCACGAAGAATGCAGCCACTTGTGTATGCATATGGGAGTTGCAGAAAATGACTCTCTTGTGGAAGGAGGTTGACAGAATGCCAAACATATGGTGCTTGGACTTTTATGGGAAGCACGTTAGAATGACTTGCCTGGGGAACAAAGGCTTGCTCATGTTGTCCTTGAGATCAAAACAAATGAACCGATTGGTTACTTACAACATAGCAAAGAAAGAATGGCTGAAGGTTCCTGGGTGTGTCGTGCCACGTGGGAGAAAACGACAGTGGATAGCATGTGGTACTGCATTTCATCCATGCCTGACTGCGGTGGTGTGA 1353 0.4538 MEGLAMLKQLIAQLQHLFDTYHSQSSLIFQQQHPRWTTSLDIEDNSVDDFCGLVMTAGKSGSFRMSEPGKPPPTKKSRRDRSRGKSSGRSCTTEVMEQEIWKDFPEDLFEAVIARLPISTFFRFRSVCRQWNSMLNSQSFSQHCTQVTQENPWFYTITHENVNSGAMYDPSLKKWHHPTISTPPTKLIVLPVASSGGLVCFLDIGHRNFFVCNPLTQSFKELPARSVKVWSRVAVGMMANGNFAGSGYKIVWVGCDGEYEVYDSVRNSWSRPGNMPVGMKLPLSLNFRSQAVSIGSTLYFMRSDPDGIVSYDMATGVWKQYIIPAPLHLTDHTLAECDGQVMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIAKKEWLKVPGCVVPRGRKRQWIACGTAFHPCLTAVV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02528 450 SUPERFAMILY Galactose oxidase, central domain 128 431 IPR011043 -
Gma11g02528 450 Gene3D - 101 140 - -
Gma11g02528 450 SUPERFAMILY F-box domain 96 175 IPR036047 GO:0005515
Gma11g02528 450 ProSiteProfiles F-box domain profile. 98 143 IPR001810 GO:0005515
Gma11g02528 450 Gene3D - 154 437 IPR015915 GO:0005515
Gma11g02528 450 PANTHER BNAA07G08860D PROTEIN 38 448 - -
Gma11g02528 450 SMART fbox_2 104 144 IPR001810 GO:0005515
Gma11g02528 450 MobiDBLite consensus disorder prediction 61 92 - -
Gma11g02528 450 Pfam F-box domain 101 140 IPR001810 GO:0005515
Gma11g02528 450 PANTHER F-BOX/KELCH-REPEAT PROTEIN 38 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02528 Gma-Chr11 40407416 40412212 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02528 - - gmx:100795488 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00052 18 426136 430925 Gma11g02528 11 40407416 40412212 GST
Gma11g02528 11 40407416 40412212 Gma05g01489 05 36774528 36778309 PCT
Gma11g02528 11 40407416 40412212 Gma08g00974 08 8221938 8225816 PCT
Gma05g01489 05 36774528 36778309 Gma11g02528 11 40407416 40412212 PCT
Gma08g00974 08 8221938 8225816 Gma11g02528 11 40407416 40412212 PCT