Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01301 ATGAGCACTGGGGAGCTTCTCAACATCGAACCTCTCGAACTCAAGTTCCCCTTTGAGCTGAAGAAGCAGATCTCATGTTCTCTTCAATTGTCCAATAAGACCGATAGCTATGTAGCCTTCAAGGTGAAAACAACCAATCCGAAGAAGTATTGTGTTCGTCCGAACACTGGGGTTGTCACGCCTCGATCTACGTGTGATGTTATCGTTACCATGCAAGCGCAAAAAGAGGCTCCTGCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGTGTAAAAACTGTTGATGGTACCAGTCCGAAGGATATCACTGCAGACATGTTCAACAAGGAGGCAGGGCATGTGGTTGAGGAGTGCAAATTGAGAGTGCTGTATGTTTCTCCACCTCAACCACCGTCTCCAGTCCCAGAAGGTTCGGAGGAAGGATCCTCACCTAGAGGTTCTGTTTCAGAGAATGGAAATGCCAATGGTTCTGACTTCACACAAGCGGCAAGAGGATTTACTGAGCGACCTGAATCTCAAGACAGATCTGCAGAGGCTAGAGCTCTTATCTCAAGGCTGACTGAAGAAAAGAATAATGCAATTCAACAAAATAGCAAGCTCTGCCAGGAACTGGAGCTACTGAAGAGGGAAGGCAACAAAAGTCGTGGTGGAGTCTCATTTGTCATTGTCGTATTAATTGGCTTGCTTGGCATAATTATGGGGTATCTCATGAAGACAACCTAA 726 0.4559 MSTGELLNIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGVVTPRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGTSPKDITADMFNKEAGHVVEECKLRVLYVSPPQPPSPVPEGSEEGSSPRGSVSENGNANGSDFTQAARGFTERPESQDRSAEARALISRLTEEKNNAIQQNSKLCQELELLKREGNKSRGGVSFVIVVLIGLLGIIMGYLMKTT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01301 241 MobiDBLite consensus disorder prediction 127 161 - -
Gma17g01301 241 MobiDBLite consensus disorder prediction 143 161 - -
Gma17g01301 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Gma17g01301 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
Gma17g01301 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Gma17g01301 241 Coils Coil 177 211 - -
Gma17g01301 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Gma17g01301 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Gma17g01301 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Gma17g01301 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01301 Gma-Chr17 11672429 11676977 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01301 - - gmx:100805159 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01301 17 11672429 11676977 Gma17g01301 17 11672429 11676977 ECH
Gma17g01301 17 11672429 11676977 Gma05g00554 05 5476002 5479948 GST
Gma17g01301 17 11672429 11676977 Gma01g02073 01 56120948 56124612 PCT
Gma17g01301 17 11672429 11676977 Gma11g00342 11 2739383 2743465 PCT