Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00342 ATGACCGCCTCTCAACTCATCTCCGTTAGTCCCGACGAACTCCGCTTCCACTTTGAGTTGGAGAAGCAAACATTTTGCGATCTTAAGGTCCTCAATAACTCCGAGAACTATGTTGCTTTCAAGGTCAAAACCACTTCTCCAAAGAAATACTTTGTGCGACCTAACACCGCTGTTGTACAGCCCTGGGACTCTTGTATCATCAGAGTCACCCTCCAAGCCCAACGGGAATACCCTCCAGACATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACAACAGTGAATCCAAATACTGATGTTGATGATCTCCCGCCAGATACTTTTAATAAGGAGAGTGGTAATTCAGTAGAGGAGTTGAAATTGAGAGTTGCATATATCTCTCCTACCTCACCTGAAGGAAGCTCTGAAGATGACGCATCAAAGAACTCGCAAAGCTTTGATACCTCTTCTAGTCAGGCTTTACAGAATCTGAAGGAAGAAAGAGATGCCGCTGCCAGACAAACGAGACAGCTGCAACAGGAACTGGACATGCTAAAAAACCGAAGAAACCGAAGAAGTGACCCTGGCTTTTCCTTAACCTTTGCCATTTTTGTGGGTCTCCTTGGAGCTTTACTTGGCTTTCTAATGAAACTTTTATTCTCTTCTCCATCTACAGAGTGA 660 0.4409 MTASQLISVSPDELRFHFELEKQTFCDLKVLNNSENYVAFKVKTTSPKKYFVRPNTAVVQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTTVNPNTDVDDLPPDTFNKESGNSVEELKLRVAYISPTSPEGSSEDDASKNSQSFDTSSSQALQNLKEERDAAARQTRQLQQELDMLKNRRNRRSDPGFSLTFAIFVGLLGALLGFLMKLLFSSPSTE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00342 219 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 3 216 IPR016763 GO:0005789
Gma11g00342 219 Gene3D Immunoglobulins 2 130 IPR013783 -
Gma11g00342 219 Coils Coil 154 181 - -
Gma11g00342 219 PIRSF VAMP_assoc_prot 133 211 IPR016763 GO:0005789
Gma11g00342 219 PIRSF VAMP_assoc_prot 1 161 IPR016763 GO:0005789
Gma11g00342 219 Pfam MSP (Major sperm protein) domain 7 104 IPR000535 -
Gma11g00342 219 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 3 216 - -
Gma11g00342 219 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Gma11g00342 219 MobiDBLite consensus disorder prediction 128 168 - -
Gma11g00342 219 SUPERFAMILY PapD-like 3 135 IPR008962 -
Gma11g00342 219 MobiDBLite consensus disorder prediction 128 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00342 Gma-Chr11 2739383 2743465 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00342 - - gmx:100794270 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02073 01 56120948 56124612 Gma11g00342 11 2739383 2743465 GST
Gma17g01301 17 11672429 11676977 Gma11g00342 11 2739383 2743465 PCT
Gma05g00554 05 5476002 5479948 Gma11g00342 11 2739383 2743465 PCT