Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01292 ATGCGAGTGAAGGAAATGCACCCGTTGTGCTGCATCTCGCTGGAGAGTCCGGGGATCGGGAGCGACTCGCCGGAGCCGGAGGCGGCGGCGCTGTCGAGGACGAGGAGTCTTCCGGCGGGCGGATCTGACGTCATTGCGCGGCGGGGATCGGAGGCTACTGTGGCCGGAGTTCTCTACAAGTGGACCAATTACGGCAAGGGATGGAGATCCCGCTGGTTCCTCCTCCGCAATGGCGTCCTCTCCTACGCCAAGATCCGCTGGCCGGAAAACCTCAACCTCCTCTCTCCGGTCGACGACGTCCGCCTCATCGGAGAAGTCACCGCCAACCGTCTCGCCAGAGAAGCCGCATCCGCCACCGTGCGCCGTAAGAATCACAAACCTCCTTCCTCCTCCTCTTCCTCCGTCGTCCATCTCAAGATCTCGTCGTTCAGAGAGAGCAAGTCAGACGATAGACGGTTCTATATATTCACGGCCACAAAGACTCTCCATCTGAGAACTGATTCGAGGAAGGACCGTGTGGCGTGGATACAAGCTTTGGTTTCAACCCGTGGATTGTACCCACTTCGACCACTCAGTGACCATCTCTCCCTCGCGCCAAATCATATATCTGTGTCAACCGAGGGGCTTAAGAAACGCTTGCTTGAAGAGGGTAGCAGTGAGAGCCTTGCCAAGGATTGCGAGCAAATCATGCTCGCGGAGTTCTCCGAATTGCAAGAGCAACTTCAGATCCTGTGTCAGGAACGAATGAATTTGCTTGATACAATAAGGCAGCTGGAGGCTGCTAATATTGAACCTGAGGCCACTGCCTTGCATGACAGTGAATACCAATTAACAAAGAATGAATTTTCAAGTCTAGGACGTGGAAAATATAGTGAATGCAGTACTACTGAATCATCTGATGATATTGAGAAGCAGGAGATGGAGGAAGTGTCAGATGAAGATGAAATCTCATATTATGACACTAAAGAGTATTTTACAGAACATGGTTTTAGGTGTGGGTCAACAGGAGGTTTGGATCCAATGAACATGTCTGGGGAAGTTAACACACAATGCATAGATTTGGAGAACAGTCTTGTTGGGCAGACGATCAATGAATTTAGGTACCCTCTGATAGCAAGGCGAAAGAAGCTTCCAGATCCTGTTGAGAAAGAGAAAGGCGTCAGTCTTTGGTCAATTATCAAAGACAATGTGGGCAAAGATCTCACACGAGTGTGCCTTCCTGTATACTTTAATGAGCCAATATCATCTCTTCAGAAATGTTTTGAGGACTTGGAGTACTCTTTTCTTCTGGATCGAGCTTATGAGTATGGAAAATCAGGAAACAGTCTACTTCGGGCACTGAATGTTGCTGCCTTTGCAATTTCTGGATATGCATCATCTGAAGGTCGTCATTGTAAACCCTTTAATCCATTGTTAGGGGAAACTTACGAAGCTGATTTTCCTGACAAAGGAGTTCGTTTCTTTTCTGAGAAGGTGAGTCACCATCCAACTGTCGTTGCCTGCCACTGTCAAGGTAGAGGTTGGAAGTTTTGGGCTGACAGTAACATTCGGTCAAAGTTTTGGGGAAGGTCAATTCAGCTTGACCCAGTGGGAGTTCTGACCCTAGAGTTTGATGATGGTGAAATATTTCAGTGGAGCAAGGTCACGACTACAATTTATAATCTTATCCTTGGCAAAATATATTGTGATCATCATGGGAACATGGACGTCCGTGGTAATCGCCAATATTCGTGCAGACTCAAGTTCAAAGAACAGGCGATTCTTGATCGAAATCCTCACCAGGTGCATGGCTTTGTTGAAGATGTAACGGGAAAAAAGGTTGCCACATTATTTGGCAAGTGGGATGACAGCATTTATTATGTTAATGGCGAAGTGAATGTGAAGCCAAAAGATTTCACTATGTCGTCAGTCACAAACTTGTTGTGGAAAAGGACTATGCCACCTTCTAATCTCACCCGCTACAATTTGACATCATTTGCCATCACACTGAATGAGCTTACTCCCGGGCTAAAGGAGAAGCTTCCACCCACGGATTCCAGGCTGAGACCAGACCAGCGACATCTAGAGAATGGGGAATACGAGAAGGCTAATATGGAGAAACAAAGGTTGGAAAAGAGGCAAAGAATGTCAAGGAAAATGCAAGAAAATGGATGGCAGCCTAGGTGGTTCCACAGAGAAAATGAAAATGGAACGTTCCGATATATTGGCGGGTATTGGGAAGCCAGAGCCCAAGGAAGATGGATTGGATGCCCAAATATCTTTGGTGAAATTCATGAAGGCAATTTTGATCCTTTAGGTGCATCTTGA 2307 0.4716 MRVKEMHPLCCISLESPGIGSDSPEPEAAALSRTRSLPAGGSDVIARRGSEATVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIRWPENLNLLSPVDDVRLIGEVTANRLAREAASATVRRKNHKPPSSSSSSVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALVSTRGLYPLRPLSDHLSLAPNHISVSTEGLKKRLLEEGSSESLAKDCEQIMLAEFSELQEQLQILCQERMNLLDTIRQLEAANIEPEATALHDSEYQLTKNEFSSLGRGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTKEYFTEHGFRCGSTGGLDPMNMSGEVNTQCIDLENSLVGQTINEFRYPLIARRKKLPDPVEKEKGVSLWSIIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSFLLDRAYEYGKSGNSLLRALNVAAFAISGYASSEGRHCKPFNPLLGETYEADFPDKGVRFFSEKVSHHPTVVACHCQGRGWKFWADSNIRSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDVRGNRQYSCRLKFKEQAILDRNPHQVHGFVEDVTGKKVATLFGKWDDSIYYVNGEVNVKPKDFTMSSVTNLLWKRTMPPSNLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANMEKQRLEKRQRMSRKMQENGWQPRWFHRENENGTFRYIGGYWEARAQGRWIGCPNIFGEIHEGNFDPLGAS 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01292 768 MobiDBLite consensus disorder prediction 288 313 - -
Gma17g01292 768 SMART PH_update 52 186 IPR001849 -
Gma17g01292 768 Gene3D - 474 644 - -
Gma17g01292 768 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 759 IPR000648 GO:0008289
Gma17g01292 768 Coils Coil 686 715 - -
Gma17g01292 768 Gene3D - 48 184 IPR011993 -
Gma17g01292 768 Pfam Pleckstrin homology domain 56 179 - -
Gma17g01292 768 SUPERFAMILY PH domain-like 51 181 - -
Gma17g01292 768 Gene3D - 685 743 - -
Gma17g01292 768 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 4 759 - -
Gma17g01292 768 Coils Coil 241 261 - -
Gma17g01292 768 SUPERFAMILY Oxysterol-binding protein-like 383 760 IPR037239 -
Gma17g01292 768 Pfam Oxysterol-binding protein 388 742 IPR000648 GO:0008289
Gma17g01292 768 ProSiteProfiles PH domain profile. 51 184 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01292 Gma-Chr17 11528016 11538675 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01292 K20456 - gmx:100793692 1556.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01292 17 11528016 11538675 Gma17g01292 17 11528016 11538675 ECH
Gma17g01292 17 11528016 11538675 Gma05g00542 05 5264143 5275288 GST
Gma01g02119 01 56527145 56537226 Gma17g01292 17 11528016 11538675 PCT
Gma11g00289 11 2324500 2333648 Gma17g01292 17 11528016 11538675 PCT