Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02119 ATGCGAGTGAAAGAGATGCACCCGCTGTGCTGTATCTCCCTCGAGAGTCCCGGAATCGGCAAATATTCGCCGGAGCGGGAGCCGGCGGCGCTTTTCCGAACCAGGAGCCTTCCGGCGGCTGGATCTCACGGCAATGCCGCTCAGGGATCGGAGACCACCGTCGCCGGCGTTCTCTACAAGTGGACCAATTACGGCAAAGGCTGGAGATCCCGCTGGTTCCTCTTGCGGAATGGCGTTCTCTCCTACGCCAAGATCCGCTGTCCGGAGAATCTCAACCTCCTCACTCCATCCGACGACGTTCGCCTCATCGGAGAGATTTCCACCAACCGTCTAGCACGAGTGGACAGCGCCGCCACCGTCACGCGACGGAAGCATCGCAAAGCTTCTTCTTCTTCTTCTTCTGGCGTAGTCCATCTCAAGATTTCGTCGTTTAGAGAGAGCAAGTCAGATGATCGGCGTTTCTATATATTTACAGCAACGAAGACCCTCCATCTGAGAACTGATTCAAGGAAAGATCGCGTGGCGTGGATACAAGCCTTGGTTTCAACACGTGGCCTGTATCCTCTTCAACCACTCAATGATCATCTCTTGCTTGCACCCAATGATATATCCTTGTCAACCGAGAGGCTTAAGACACGCTTGCTTGAAGAGGGTACCGGTGAGAACCTTGTAAAAGAGTGCGAGCAAATCATGCTCTCAGAGTTCTCCGAAATGCAAGGACAGCTTGAAGTTCTTTGTCAAGAGCGATCTAATTTGCTCGATACAATAAGGCAGTTAGAGGCAGCTAATACTGAGCCTGAGGCCTCTGCTATACACGATGGTGAATACCAATTAACAAAGAATGAGTTTTCAAGTCTTGGACGTGGAAAATATAGTGAATGTAGTACAACTGAATCATCTGATGATATTGAGAAACAAGAGATGGAGGAAGTGTCAGATGAAGATGAAATCTCATATTATGATACTAGAGAGTGTTTTACGGAGCCTGATTGCAAGTGTGAGTCAGCAGAAGCTATGAATCAAGTGGACAGGTGTAGGGAGGCCAACACACAATATACTGATACAGAGAACATTCATCCTGAGAAAATGGTGTGTAATTATAAGCACCCTCAGTTAGCAAGACGAAAAAAGCTTCCAGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCAATGATCAAGGACAATGTGGGAAAAGATCTAACGAGAGTTTGTCTCCCGGTATACTTTAATGAGCCGATATCATCCCTACAAAAATGTTGTGAGGACTTGGAGTACTCTTATCTTCTGGATCAAGCTTATGAGTACGGAAAATCAGGAAACGGTCTCCTTCGGGCACTTTATGTTGCTGCCTTTGCAGTTTCCGGATATGCGTCATCTGAAGGTCGTAATTGTAAACCCTTTAATCCTTTATTAGGAGAAACCTACGAAGCTGATTACCCCGACAAAGGAATTCGCTTCTTTTCCGAGAAGGTCAGTCACCATCCAACTCTCATTGCCTGCCACTGCGAAGGTAGAGGATGGAAGTTTTGGGCTGACAGCAACATCCATTCAAAGTTTTGGGGAAGGTCAATTCAGCTTGACCCAGTGGGTGTTCTGACCCTAGAGTTTAGTGATGGTGAAATATTTCAGTGGAGCAAGGTCACCACCACGATCTATAATCTTATCCTTGGGAAAATATACTGTGATCATCATGGGAGCATGGATATACGCGGTAATCGTACATATTCATGCAGACTCAAGTTCAAAGAGCAGACGATCCTTGATCGAAATCCTCGCCAGGTGCATGGATTTGTCGAAGATGTAACGGGAAAAAGAGTTGCCACATTATTTGGCAAGTGGGATGACAACATGTATTATATGAGTGGTAATATAAATGTCAAGCCTAAAGATTTCACTTCAGCAAACGCATCCTTGTTGTGGAAAAGGACTATGCCATCTCCCAATCTCACCCGGTATAATTTGACACCATTTGCCATCACTCTGAATGAGCTTACTCCGGGACTGAAGCTTTTTCTGATCCCGGGTATTTGA 2037 0.4629 MRVKEMHPLCCISLESPGIGKYSPEREPAALFRTRSLPAAGSHGNAAQGSETTVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIRCPENLNLLTPSDDVRLIGEISTNRLARVDSAATVTRRKHRKASSSSSSGVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALVSTRGLYPLQPLNDHLLLAPNDISLSTERLKTRLLEEGTGENLVKECEQIMLSEFSEMQGQLEVLCQERSNLLDTIRQLEAANTEPEASAIHDGEYQLTKNEFSSLGRGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTRECFTEPDCKCESAEAMNQVDRCREANTQYTDTENIHPEKMVCNYKHPQLARRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCCEDLEYSYLLDQAYEYGKSGNGLLRALYVAAFAVSGYASSEGRNCKPFNPLLGETYEADYPDKGIRFFSEKVSHHPTLIACHCEGRGWKFWADSNIHSKFWGRSIQLDPVGVLTLEFSDGEIFQWSKVTTTIYNLILGKIYCDHHGSMDIRGNRTYSCRLKFKEQTILDRNPRQVHGFVEDVTGKRVATLFGKWDDNMYYMSGNINVKPKDFTSANASLLWKRTMPSPNLTRYNLTPFAITLNELTPGLKLFLIPGI 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02119 678 Coils Coil 242 262 - -
Gma01g02119 678 ProSiteProfiles PH domain profile. 51 185 IPR001849 -
Gma01g02119 678 Gene3D - 475 647 - -
Gma01g02119 678 Pfam Pleckstrin homology domain 56 180 - -
Gma01g02119 678 SUPERFAMILY PH domain-like 50 182 - -
Gma01g02119 678 SUPERFAMILY Oxysterol-binding protein-like 384 646 IPR037239 -
Gma01g02119 678 Pfam Oxysterol-binding protein 389 669 IPR000648 GO:0008289
Gma01g02119 678 SMART PH_update 52 187 IPR001849 -
Gma01g02119 678 PANTHER OXYSTEROL-BINDING PROTEIN, PH DOMAIN-LIKE PROTEIN-RELATED 4 673 - -
Gma01g02119 678 Gene3D - 47 185 IPR011993 -
Gma01g02119 678 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 673 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02119 Gma-Chr1 56527145 56537226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02119 K20456 - gmx:100819924 1367.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02119 01 56527145 56537226 Gma01g02119 01 56527145 56537226 ECH
Gma01g02119 01 56527145 56537226 Gma11g00289 11 2324500 2333648 GST
Gma01g02119 01 56527145 56537226 Gma17g01292 17 11528016 11538675 PCT
Gma01g02119 01 56527145 56537226 Gma05g00542 05 5264143 5275288 PCT