Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00289 ATGCGAGTGAAAGAGATGCACCCGCTGTGCTGTATCTCCCTCGAGAGTCCAGGAATCGGCAAACATTCGCCGGAGCGGGAGCCGGCGGCGCTTTTCCGAACCAGTAGCCTCCCGGCGGCGGGATCTCATGGCAATGCTGCTCAGGGATCGGAGACCACCGTCGCCGGCGTTCTCTACAAATGGACCAACTACGGCAAAGGCTGGAGATCCCGCTGGTTCCTCTTGCGGAATGGCGTTCTCTCCTACGCCAAGATCCGCTGTCCGGAGAATCTCAACCTCCTCATTCCTTCCGACGACGTTCGCCTCATCGGAGAAATTTCCACCAACCGTCTCGCACGAGTGGACGGCGCCGCCACTGTCACACGACGGAAGCACCGCAAAACTTCTTCTTCTTCCGGCGTTGTCCATCTCAAGATTTCGTCGTTTAGAGAGAGCAAGTCAGATGATCGGCGTTTCTATATATTTACAGCAACGAAGACATTCCATCTGAGAACTGATTCGAGGAAAGATCGGGTGGCGTGGATACAAGCCTTGGTTTCAACACGTGGCCTGTATCCTCTTCAACCACTCAATGATCATCTCTTGCTTGCACCTAATAATATATCCTTGTCAACCGAGAGGCTTAAGATACGCTTGCTTGAAGAGGGTACCGGTGAGAACCTTGTAAAGGAGTGTGAGCAAATTTTGCTCACAGAGTTCTCCGAAATGCAAGGACAACTTGAAGTTCTTTGTCAAGAGCGATCTAATTTGCTCGATACAATAAGGCAGTTAGAGGCAGCTAATACTGAACCTGAGGCCGCTGCCATACACAATGGTGAATACCAATTAACAAAGAATGAGTTTTCAAGTCTTGGACGTGGAAAATATAGTGAATGTAGTACAACTGAATCATCTGATGATATTGAGAAACAAGAGATGGAGGAAGTGTCAGATGAAGATGAAATCTCATATTATGATACCAGAGAGTGTTTTACAGAGCCTGATTGCAAGTGTGAGTCAGCGGGAGCTATGAATCAAGTGGACAGGTGTAGGGAACCCAACACACTATACACTGATACAGAGAACATTCATCCTGAGAAAATGGTCTGTAATTATAAGCACCCTCAGATAGCAAGACGAAAAAAGCTTCCAGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCAATGATCAAGGACAATTTGGGAAAAGATCTAACGAGAGTTTGTCTCCCGGTATACTTTAATGAGCCGATATCATCCCTACAAAAGTGTTGTGAGGACTTGGAGTACTCTTATCTTCTGGATCAAGCTTATGAGTACGGAAAATCAGGAAACGGTCTCCTTCGGGCATTGTATGTTGCCGCATTTGCAGTTTCCGGATATGCGTCATCTGAAGGTCGTAATTGTAAACCCTTTAATCCTTTATTAGGAGAAACCTACGAAGCTGATTACCCCGACAAAGGAATTCGCTTCTTTTCCGAGAAGGTCAGTCACCATCCGACTCTCATTGCCTGCCACTGCGAAGGTAGAGGATGGAAGTTTTGGGCTGACACCAACATCCATTCAAAGTTTTGGGGAAGGTCAATTCAGCTTGACCCAGTGGGTGTTCTGACCCTAGAGTTCAGTGATGGGGAAATATTTCAGTGGAGCAAGGTCACCACCACGATCTATAATCTTATCCTTGGGAAAATATACTGTGATCATCATGGGAACATGGATATACGTGGTAATCGTACATATTCATGCAGACTCAAGTTCAAAGAGCAGACGATCCTTGATCGAAATCCTCGCCAGGTGCATGGATTTATCGAAGATGTAACAGGGAAAAAAGTTGCCACATTATTTGGCAAGTGGGATGACAGCATGTATTATATGAATGGCAATGTAAATGTCAAGCCTAAAGATTTCACTTCATCAAACGCATCCTTGTTGTGGAAAAGGACTATGCCATCTCCTAATCTCACCCGGTATAATTTGACACCATTTGCCATCACTCTGAATGAGCTTACTCCGGGACTGAAGGAGAAGCTCCCGCCCACGGATTCCAGGCTCAGACCAGATCAACGGGATCTAGAGAATGGGGAATACGAGAGGGCTAATTTGGAGAAACAAAGGTTGGAAAAGCGGCAGAGAATGTCAAGGAAAATACAAGAAAGTGGTTGGAAGCCTAGGTGGTTCCGAAGAGAAGGTGAAAATGGAACATTTCGATACGTTGGTGGACTCTACCGATCCGTTAGGTGCATCTTAATTTGGTTCAGAATGGGGGATTAA 2256 0.4614 MRVKEMHPLCCISLESPGIGKHSPEREPAALFRTSSLPAAGSHGNAAQGSETTVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIRCPENLNLLIPSDDVRLIGEISTNRLARVDGAATVTRRKHRKTSSSSGVVHLKISSFRESKSDDRRFYIFTATKTFHLRTDSRKDRVAWIQALVSTRGLYPLQPLNDHLLLAPNNISLSTERLKIRLLEEGTGENLVKECEQILLTEFSEMQGQLEVLCQERSNLLDTIRQLEAANTEPEAAAIHNGEYQLTKNEFSSLGRGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTRECFTEPDCKCESAGAMNQVDRCREPNTLYTDTENIHPEKMVCNYKHPQIARRKKLPDPVEKEKGVSLWSMIKDNLGKDLTRVCLPVYFNEPISSLQKCCEDLEYSYLLDQAYEYGKSGNGLLRALYVAAFAVSGYASSEGRNCKPFNPLLGETYEADYPDKGIRFFSEKVSHHPTLIACHCEGRGWKFWADTNIHSKFWGRSIQLDPVGVLTLEFSDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRTYSCRLKFKEQTILDRNPRQVHGFIEDVTGKKVATLFGKWDDSMYYMNGNVNVKPKDFTSSNASLLWKRTMPSPNLTRYNLTPFAITLNELTPGLKEKLPPTDSRLRPDQRDLENGEYERANLEKQRLEKRQRMSRKIQESGWKPRWFRREGENGTFRYVGGLYRSVRCILIWFRMGD 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00289 751 Pfam Pleckstrin homology domain 56 178 - -
Gma11g00289 751 Gene3D - 473 644 - -
Gma11g00289 751 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 354 738 IPR000648 GO:0008289
Gma11g00289 751 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 338 IPR000648 GO:0008289
Gma11g00289 751 Pfam Oxysterol-binding protein 387 727 IPR000648 GO:0008289
Gma11g00289 751 SUPERFAMILY Oxysterol-binding protein-like 382 733 IPR037239 -
Gma11g00289 751 MobiDBLite consensus disorder prediction 672 693 - -
Gma11g00289 751 Coils Coil 240 260 - -
Gma11g00289 751 SUPERFAMILY PH domain-like 50 180 - -
Gma11g00289 751 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 354 738 - -
Gma11g00289 751 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 4 338 - -
Gma11g00289 751 SMART PH_update 52 185 IPR001849 -
Gma11g00289 751 Gene3D - 683 734 - -
Gma11g00289 751 Coils Coil 684 713 - -
Gma11g00289 751 Gene3D - 47 183 IPR011993 -
Gma11g00289 751 MobiDBLite consensus disorder prediction 673 693 - -
Gma11g00289 751 ProSiteProfiles PH domain profile. 51 183 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00289 Gma-Chr11 2324500 2333648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00289 K20456 - gmx:100808953 1505.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00289 11 2324500 2333648 Gma11g00289 11 2324500 2333648 ECH
Gma01g02119 01 56527145 56537226 Gma11g00289 11 2324500 2333648 GST
Gma11g00289 11 2324500 2333648 Gma17g01292 17 11528016 11538675 PCT
Gma11g00289 11 2324500 2333648 Gma05g00542 05 5264143 5275288 PCT