Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00542 ATGCGAGTGAAGGAAATGCACCCGTTGTGCTGCATCTCGCTTGAGAGTCCGGGGATCGGGAGCGACTCGCCGGAGCCGGAGGCGGCGGCGTTGTCGAGGACGAGGAGTCTTCCGGCCGGCGGATCTGATGGCATTGCGCGGCGGGGATCGGAGGCCACGGTGGCCGGAGTTCTCTATAAGTGGACTAATTACGGCAAGGGATGGAGATCCCGCTGGTTCCTCCTCCGCAATGGCGTCCTCTCCTACGCCAAGATCCGCTGGCCGGAAAACCTCAACCTCCTCTCTCCGGTCGACGACGTCCGCCTCATCGGTGAAGTCACTGCCAACCGCCTCGCCAGAGAAGCCGCCTCCGCCGCCGCCACCGTGCGGCGGAAGAATCACAAACCTCCTTCCTCCTCCTCCTCCTCCGCCGTCGTCCATCTCAAGATCTCGTCATTCAGGGAGAGCAAGTCAGACGATAGACGGTTCTATATATTCACATCAACAAAGACTCTCCATCTGAGAACCGATTCGAGGAAGGACCGTGTGGCGTGGATACAAGCTTTGGTTTCAACCCGCGGATTGTACCCACTTCGACCACTCAGTGACCATCTCTCCCTCGCGCCAAATAATATATCTGTGTCAGCCGAGAGGCTTAAGAAACGCTTGCTTGAAGTGGGTAGCAGTGAGAGTCTTGTCAAGGATTGCGAGCAAATCATGCTCGCTGAGTTCTCCGAATTGCAAGAGCAACTTCAGATCCTATGTCAGGAACGAATGAATTTGCTTGATACAATAAGGCAGCTGGAGGCTGCTAATATTGAACCTGAGGCCACTGCCTTGCATGACAGTGAATACCAATTAACAAAGAATGAATTTTCAAGTCTAGGACGTGGAAAATATAGTGAATGCAGTACTACTGAATCATCTGATGATATTGAGAAACAGGAGATGGAGGAAGTGTCAGATGAAGATGAAATCTCATATTATGACACTAAAGAGTATTTTACAGAACATGGTTTTAGGTGTGGGTCAACAGGAGATTTGGATTCAATGAACATGTCTGGGGAAGGTAACACACAGTGCATTGATTTGGAGAACAGTCTTGTTGGGAAGACGATCAATGATTTTGGGTACCCTCAGATAGCAAGGCGAAAGAAGCTTCCAGATCCTGTTGAGAAAGAGAAAGGCGTTAGTCTTTGGTCAATTATCAAAGACAATGTGGGCAAAGATCTAACACGAGTGTGTCTTCCTGTATACTTTAATGAGCCAATATCATCTCTTCAGAAATGTTTTGAGGACTTTGAGTACTCTTTTCTTCTGGATCGAGCTTATGAGTATGGAAAATCTGGAAACAGTCTCCTTCGGGCACTGAATGTTGCTGCCTTTGCAATTTCTGGATATGCATCATCTGAAGGTCGTCATTGTAAACCCTTTAATCCATTGTTAGGGGAAACTTACGAAGCTCATTTTCCTGACAAAGAAGTTCGCTTCTTTTCTGAGAAGGTGAGTCACCATCCAACTGTCGTTGCCTGCCACTGTGAAGGTAGAGGTTGGAAATTTTGGGCTGACAGTAACATTCGGTCAAAGTTTTGGGGAAGGTCAATTCAGCTTGACCCAGTGGGAGTTCTGACCCTAGAGTTTGATGATGGTGAAATATTTCAGTGGAGCAAGGTCACGACTACAATTTATAATCTTATCCTTGGCAAAATATATTGTGATCATCATGGGAACATGGACATCCGAGGTAATCGTCAATATTCGTGCAGACTCCAGTTCAAAGAACAGGCGATTCTTGATCGAAACCCTCACCAGGTACATGGCTTTGTTGAAGATGTAATGGGAAAAAAGGTTGCCACATTATTTGGCAAGTGGGATGACAGCATTTATTATGTTAATGGCGAAGTTAATGTGAAGCCAAAAGATTTCACTATGTCAGACACAAACTTGCTGTGGAAAAGGACTAAGCCACCTTCTAATCTCACCCGCTACAATTTGACATCATTTGCCATCACACTCAATGAGCTTACTCCCGGGCTAAAGGAGAAGCTTCCACCCACGGATTCCAGGCTGAGACCAGATCAGCGGCATCTAGAGAATGGGGAATACGAGAAGGCTAATATGGAAAAACAAAGGTTGGAAAAGAGGCAAAGAATGTCAAGGAAAATGCAAGAAAATGGATGGCAGCCTAGGTGGTTCCACAGACAGAGTGAAAATGGAACGTTCCGATATACTGGCGGGTGCATCTTGATGTTAGTTCAGataatgataatgataatgataatgaATGCAAATTACTATGTGGAGGGTTTATCTTGA 2295 0.4636 MRVKEMHPLCCISLESPGIGSDSPEPEAAALSRTRSLPAGGSDGIARRGSEATVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIRWPENLNLLSPVDDVRLIGEVTANRLAREAASAAATVRRKNHKPPSSSSSSAVVHLKISSFRESKSDDRRFYIFTSTKTLHLRTDSRKDRVAWIQALVSTRGLYPLRPLSDHLSLAPNNISVSAERLKKRLLEVGSSESLVKDCEQIMLAEFSELQEQLQILCQERMNLLDTIRQLEAANIEPEATALHDSEYQLTKNEFSSLGRGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTKEYFTEHGFRCGSTGDLDSMNMSGEGNTQCIDLENSLVGKTINDFGYPQIARRKKLPDPVEKEKGVSLWSIIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDFEYSFLLDRAYEYGKSGNSLLRALNVAAFAISGYASSEGRHCKPFNPLLGETYEAHFPDKEVRFFSEKVSHHPTVVACHCEGRGWKFWADSNIRSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQYSCRLQFKEQAILDRNPHQVHGFVEDVMGKKVATLFGKWDDSIYYVNGEVNVKPKDFTMSDTNLLWKRTKPPSNLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANMEKQRLEKRQRMSRKMQENGWQPRWFHRQSENGTFRYTGGCILMLVQIMIMIMIMNANYYVEGLS 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00542 764 Gene3D - 687 741 - -
Gma05g00542 764 SUPERFAMILY Oxysterol-binding protein-like 386 737 IPR037239 -
Gma05g00542 764 ProSiteProfiles PH domain profile. 51 187 IPR001849 -
Gma05g00542 764 MobiDBLite consensus disorder prediction 15 45 - -
Gma05g00542 764 SUPERFAMILY PH domain-like 51 184 - -
Gma05g00542 764 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 4 739 - -
Gma05g00542 764 Pfam Pleckstrin homology domain 56 182 - -
Gma05g00542 764 Gene3D - 48 187 IPR011993 -
Gma05g00542 764 Coils Coil 244 264 - -
Gma05g00542 764 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 739 IPR000648 GO:0008289
Gma05g00542 764 SMART PH_update 52 189 IPR001849 -
Gma05g00542 764 Coils Coil 688 717 - -
Gma05g00542 764 Pfam Oxysterol-binding protein 391 731 IPR000648 GO:0008289
Gma05g00542 764 Gene3D - 477 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00542 Gma-Chr5 5264143 5275288 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00542 K20456 - gmx:100812205 1474.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00542 05 5264143 5275288 Gma05g00542 05 5264143 5275288 ECH
Gma17g01292 17 11528016 11538675 Gma05g00542 05 5264143 5275288 GST
Gma01g02119 01 56527145 56537226 Gma05g00542 05 5264143 5275288 PCT
Gma11g00289 11 2324500 2333648 Gma05g00542 05 5264143 5275288 PCT