Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01286 ATGGATCATCGCAAACCATTGTTACCCACTTCCTCTGACGATGCTCCAAATCCACGCACTCGGAAGGACCTTGTTCTAATGATTTGCGGTTTGTTTTTGCTCTCTTCCCTTGTTGCCTTTGGAGGGTACAGGGCCTCCAACGCGCCACATGCTGACGTGTCATCGCCAGCATCGAACGATGAACAACCTAGTCCCACATCGGTGCCTTCTCCGAAATGGTACCCGGTTTCACGGGGTGTTTCTTCTGGGGTGTCGGAGAAGTCATCAAGCATGTTGTTTGCGGTTAAAGATGGAGCTTCGGAAGCATTTCCTTGGGACAATAGCATGCTGTCGTGGCAGAGAACTGCTTTTCATTTCCAACCAGAGAAAAACTGGATGAACGATCCTAACGGTCCTATGTACTACAAGGGATGGTATCACTTCTTCTACCAATACAACCCGAACGGTGCAGTTTGGGGTGACATAGTTTGGGGACACGCAGTGTCAAGGGACATGATCCACTGGCTTCACCTTCCACTAGCAATGGTGGCTGATCAATGGTATGACATGCAAGGTGTGTGGACAGGCTCAGCCACGATCTTACCAAACGGTGAAATCATCATGTTATACACGGGTTCCACCAACGAGTCAGTGCAGGTTCAAAACCTTGCATACCCTGCAGACCCCTCTGACCCTCTCCTTGTGGATTGGATCAAATACCCTGGAAACCCCGTTTTGGTGCCACCACCAGGCATTGGTACTAAGGACTTTCGCGACCCGACAACCGCGTGGCTCACCTCCGAAGGGAAGTGGCGAATCACCATAGGATCCAAGCTCAACAAAACAGGCATTGCATTGGTTTATGACACTGAGGACTTCAAGAGCTATGAGCTCAAGGAGGGTTTGCTTCGCGCTGTCGATGGCACCGGCATGTGGGAGTGTGTGGACTTCTTCCCTGTGTCCAAGAAGAATGAGAATGGATTGGATACATCTGTTAATGGGGATGAGGTGAAGCATGTGATGAAGGTGAGCCTGGATGATGATAGACATGATTACTATGCAATTGGGACTTATGATGAGAAGAGTGTCTTGTTCACACCAGATGATGCTAAGAATGATGTTGGTGTTGGATTAAGGTATGACTACGGGATATTCTATGCATCCAAGACGTTTTATGATCAGAATAAGGAGAGGAGACTTTTGTGGGGTTGGATTGGAGAGTCTGACAGTGAATATGCTGATGTAGCCAAAGGTTGGGCTTCAGTTCAGAGTATTCCTAGAACTGTGGAGCTTGATAGGAAGACTGGCAGCAACTTGCTTCAGTGGCCTGTTGCTGAGGTGGAGAGTTTGAGATTGAGAAGTGATGAATTCAAAAATTTGAAGGCTAAACCAGGGTCAGTCGTGTCAATAGATATTGAAACAGCCACACAGTTGGACATTGTTGCCGAGTTTGAGATAGACAAGGAAACCCTTGAGAAAACACCTGAATCCAACGAGGAGTACACGTGTGGCAACAGTGGTGGATCTAAACAACGTGGTGCCTTAGGACCTTTTGGTCTTTTGGTTTTGGCAGATGAGGGCCTTTTTGAGTATACTCCTCAGTATTTTTATGTCATTAAAGGGAGCAATGGAAATCTTAAGACTTCCTTTTGCGCTGATCAATCAAGGTCTTCTCAGGCAAATGATGTTCGCAAGCAAATCGTTGGCAGCGCTGTTCCAGTACTTAAAGATGAAAAGTTTTCCTTGCGGATACTGGTGGACCATTCTATTGTTGAAAGCTTTGCTCAAGGTGGAAGGACGGTTGTGACATCTCGGGTTTATCCAACAAAGGCAATCTATGGAGCTGCTAGGTTGTTCTTGTTCAACAATGCTACTGAGGCCACTGTGACAGCCTCACTCAATGTTTGGCAAATGAATTCTGCATTTATACGCCCATTCCACCCTGATCAGAAGAATTAA 1938 0.4685 MDHRKPLLPTSSDDAPNPRTRKDLVLMICGLFLLSSLVAFGGYRASNAPHADVSSPASNDEQPSPTSVPSPKWYPVSRGVSSGVSEKSSSMLFAVKDGASEAFPWDNSMLSWQRTAFHFQPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADQWYDMQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKYPGNPVLVPPPGIGTKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTEDFKSYELKEGLLRAVDGTGMWECVDFFPVSKKNENGLDTSVNGDEVKHVMKVSLDDDRHDYYAIGTYDEKSVLFTPDDAKNDVGVGLRYDYGIFYASKTFYDQNKERRLLWGWIGESDSEYADVAKGWASVQSIPRTVELDRKTGSNLLQWPVAEVESLRLRSDEFKNLKAKPGSVVSIDIETATQLDIVAEFEIDKETLEKTPESNEEYTCGNSGGSKQRGALGPFGLLVLADEGLFEYTPQYFYVIKGSNGNLKTSFCADQSRSSQANDVRKQIVGSAVPVLKDEKFSLRILVDHSIVESFAQGGRTVVTSRVYPTKAIYGAARLFLFNNATEATVTASLNVWQMNSAFIRPFHPDQKN 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01286 645 SUPERFAMILY Arabinanase/levansucrase/invertase 111 437 IPR023296 -
Gma17g01286 645 SMART glyco_32 118 591 IPR001362 GO:0004553|GO:0005975
Gma17g01286 645 Gene3D Glycosyl hydrolase domain; family 43 122 447 IPR023296 -
Gma17g01286 645 MobiDBLite consensus disorder prediction 50 72 - -
Gma17g01286 645 Pfam Beta-fructofuranosidase, N-terminal domain 6 110 IPR021792 GO:0004564
Gma17g01286 645 SUPERFAMILY Concanavalin A-like lectins/glucanases 436 635 IPR013320 -
Gma17g01286 645 MobiDBLite consensus disorder prediction 51 67 - -
Gma17g01286 645 CDD GH32_Fruct1-like 124 424 - -
Gma17g01286 645 Gene3D - 448 631 - -
Gma17g01286 645 Pfam Glycosyl hydrolases family 32 C terminal 439 630 IPR013189 -
Gma17g01286 645 ProSitePatterns Glycosyl hydrolases family 32 active site. 118 131 IPR018053 GO:0004553|GO:0005975
Gma17g01286 645 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 15 640 - -
Gma17g01286 645 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 15 640 - -
Gma17g01286 645 Pfam Glycosyl hydrolases family 32 N-terminal domain 118 436 IPR013148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01286 Gma-Chr17 11433678 11438259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01286 18 639 Glycoside Hydrolase AT1G12240 65.769 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01286 K01193 - gmx:100799487 1320.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01286 17 11433678 11438259 Gma17g01286 17 11433678 11438259 ECH
Gma17g01286 17 11433678 11438259 Gma05g00537 05 5169444 5173611 GST
Gma01g02122 01 56597990 56602872 Gma17g01286 17 11433678 11438259 PCT
Gma11g00283 11 2247933 2255619 Gma17g01286 17 11433678 11438259 PCT