Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00537 ATGGATCATCGCAAACCATTGCTACCCACTTCCTCTGATGCTGCTCCAAATCCACACACTCGCAAGGACCTTCTTCTAGTTATTTGCGGCTTGCTATTACTCTCTTCCCTTGTTGCCTTTGGAGGGTACAGGGCCTCCAACGCGCCGCATGCCGACGTGGCATCGGCAACATCGAACGATGAGCAACGTAGTCCGACATCGGTGCCTTCTCCGAAATGGTACCCGGTTTCGCGAGGTGTTTCTTCCGGGGTGTCAGAGAAGTCATCAAGCATGTTGTTTGCGGTTAAAGATGGAGCTTCGAAGGCATTTCCATGGGACAACAGCATGTTGTCTTGGCAGAGAACTGCTTTTCATTTCCAACCAGAGAAAAACTGGATGAACGGTCCTATGTACTACAAGGGATGGTATCACTTTTTCTACCAATACAACCCGAACGGTGCAGTTTGGGGTGACATAGTTTGGGGACATGCAGTTTCAAGGGACATGATCCATTGGCTTCACCTTCCACTGGCAATGGTGGCTGATCAATGGTATGACATGCAAGGTGTGTGGACAGGCTCAGCCACAATCTTACCAAATGGTGAAATCATCATGTTATACACAGGTTCCACCAACGAGTCAGTGCAGGTTCAAAACCTTGCATACCCTGCAAACCCCTCTGACCCTCTCCTTGTGGATTGGATCAAATACCCTGGGAACCCCGTTTTGGTGCCACCACCAGGCATTGGGGCCAAGGACTTTCGTGACCCAACAACAGCGTGGCTCACCTCAGAAGGGAAGTGGCGAATCACCATAGGTTCCAAGCTCAACAAAACCGGCATTGCGTTGGTTTATGACACTGAGGACTTCAAGAACTATGAGCTCAAGGAGGGGCTGCTTCGTGCTGTCGCTGGCACCGGCATGTGGGAGTGTGTGGACTTCTTCCCTGTGTCCAAGGAGAATGAGAATGGATTGGATACTTCTATTAATGGGGCTGAGGTGAAGCATGTGATGAAGGTGAGCCTGGATGATGATAGACATGATTACTATTCAATTGGGACTTATGATGAGAAGAATGTTCTGTTCACACCAGATGATGCTAAGAATGATGTTGGCGTTGGATTGAGGTATGACTATGGGATATTCTATGCATCCAAGACGTTTTATGATCAGAATAAGGAGAGGAGAGTTTTGTGGGGTTGGATTGGGGAGTCTGACAGTGAATATGCTGATGTGGCCAAAGGTTGGGCTTCAGTTCAGAGTATTCCTAGAACTGTGGAGCTTGATAGGAAGACTGGCAGCAACTTACTTCAGTGGCCTGTTGCTGAGATCGAGAGTTTGAGATTGAGAAGTGATGAATTTAAAAAATTGAAGGCTAAACCAGGGTCAGTGGTGTCAGTAGATATTGAAACAGCCACGCAGTTGGACATTGTTGCCGAGTTTGAGATAGACAAGGAAACCCTTGACAAAATTCCTCAATCCAACGAGGAATACACGTGCAGCACCAGTGGTGGATCTAAACAACGTGGTGCCTTAGGACCTTTTGGTCTTTTGGTTTTGGCAGATGAGGGGCTTTCTGAGTATACTCCTCAGTATTTTTATGTCATTAAAGGGAGCAATGGAAATCTTAAGACTTCCTTTTGTGCTGATCAATCAAGGTCTTCTCAGGCAAATGATGTCCGCAAGCAAATCGTTGGCAGCGCTGTTCCAGTTCTTAAAGGCGAAAAGTTTTCCTTGCGGATACTGGTGGACCATTCTATTGTTGAAAGCTTTGCTCAAGGTGGAAGGACGGTTGTGACATCTCGGGTTTATCCAACAAAGGCAATCTATGGAGCTGCTAGGTTGTTCTTGTTCAACAATGCTACCGAGGCCACTGTGACAGCCTCACTAAAAGTTTGGCAAATGAATTCTGCATTTATACGCCCATTCCACCCTGATCAGAAGAGTTAA 1929 0.4702 MDHRKPLLPTSSDAAPNPHTRKDLLLVICGLLLLSSLVAFGGYRASNAPHADVASATSNDEQRSPTSVPSPKWYPVSRGVSSGVSEKSSSMLFAVKDGASKAFPWDNSMLSWQRTAFHFQPEKNWMNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADQWYDMQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPANPSDPLLVDWIKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTEDFKNYELKEGLLRAVAGTGMWECVDFFPVSKENENGLDTSINGAEVKHVMKVSLDDDRHDYYSIGTYDEKNVLFTPDDAKNDVGVGLRYDYGIFYASKTFYDQNKERRVLWGWIGESDSEYADVAKGWASVQSIPRTVELDRKTGSNLLQWPVAEIESLRLRSDEFKKLKAKPGSVVSVDIETATQLDIVAEFEIDKETLDKIPQSNEEYTCSTSGGSKQRGALGPFGLLVLADEGLSEYTPQYFYVIKGSNGNLKTSFCADQSRSSQANDVRKQIVGSAVPVLKGEKFSLRILVDHSIVESFAQGGRTVVTSRVYPTKAIYGAARLFLFNNATEATVTASLKVWQMNSAFIRPFHPDQKS 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00537 642 CDD GH32_Fruct1-like 124 421 - -
Gma05g00537 642 Pfam Glycosyl hydrolases family 32 C terminal 436 627 IPR013189 -
Gma05g00537 642 Pfam Beta-fructofuranosidase, N-terminal domain 6 110 IPR021792 GO:0004564
Gma05g00537 642 SMART glyco_32 118 588 IPR001362 GO:0004553|GO:0005975
Gma05g00537 642 Gene3D - 445 628 - -
Gma05g00537 642 Pfam Glycosyl hydrolases family 32 N-terminal domain 118 433 IPR013148 -
Gma05g00537 642 SUPERFAMILY Arabinanase/levansucrase/invertase 111 434 IPR023296 -
Gma05g00537 642 SUPERFAMILY Concanavalin A-like lectins/glucanases 433 632 IPR013320 -
Gma05g00537 642 Gene3D Glycosyl hydrolase domain; family 43 122 444 IPR023296 -
Gma05g00537 642 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 14 637 - -
Gma05g00537 642 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 14 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00537 Gma-Chr5 5169444 5173611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00537 3 636 Glycoside Hydrolase AT1G12240 64.482 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00537 K01193 - gmx:100788844 1293.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00537 05 5169444 5173611 Gma05g00537 05 5169444 5173611 ECH
Gma17g01286 17 11433678 11438259 Gma05g00537 05 5169444 5173611 GST
Gma01g02122 01 56597990 56602872 Gma05g00537 05 5169444 5173611 PCT
Gma11g00283 11 2247933 2255619 Gma05g00537 05 5169444 5173611 PCT