Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02122 ATGGGAAGCCCCAACACAAGAACCAGCTCCTCGTCTGATTCCGAACTCCCTTGCTCTAATTACATTCCGGTACCCGATGGACCCCACTCTCCCGCAGAACCAGCTCGAAGAGAGGTGATTGTAATCTTTTGTGGGTTGCTGGTGCTTGTGTCCTTGGTGGCTTTCAATGGTTACAGCTGGGCGCATTCAAATGGAcatgatggagatcatcatcatgcgtcatcatcattgccaacaacgttgttaacagtaACACCCAATGAATTGGAACTGAGCCCCGACACAGTGCCATGGTCAACATGGCAGACGACGCTTTCACGTGGCGTGTCTGCAGGGGTCTCGGAGAAGTCCAGCTGGCTATTCAACAGCAACAATGGGAACGGGGAATCGTATCCTTGGAACAATAGCATGCTGTCATGGCAGAGAACAGCTTACCATTTCCAACCTGAGAAGAATTGGATGAACGATCCTAATGGTCCAATGTACTACAAAGGGTGGTATCACTTCTTCTACCAGTACAATCCAAACGGTGCAGTTTGGGGTGACATAGTTTGGGGACACGCTGTGTCAAGGGACATGATTCACTGGTTTCACCTTCCACTTGCAATGGTGGCTGATCAATGGTATGACAAAAACGGTGTGTGGACAGGCTCTGCCACCATCTTACCCGATGGTCAAGTCATCATGCTATACACTGGTTCCACCAACGAGTCAATGCAAGTGCAAAACCTTGCATACCCTGCAGACCCCTCTGATCCCCTCCTTGTTGATTGGATCAAATACCCTGCAAATCCTGTTCTATTCCCACCACCTGGCATTGATGCCAAAGATTTTCGTGACCCCACCACTGCATGGATCACCTCTGAAGGAAAGTGGCGCATCAGTATTGGTTCCAAGCTTAACAAAACTGGCATTGCCTTGGTTTATGATACCAATGACTTCAAGACCTTTGAGCGTGTGGAGGGAGTGCTTCATGTTGTCCCTGGCACTGGCATGTGGGAGTGTGTTGACTTTTTCCCTGTATCTAGCAAGGGTGAAAATGGCCTTGATACTTCAATCAATGGGGAGAATGTGAAGCATGTGGTAAAGGTTAGCTTGGATGATGATAGACATGATTACTATGCACTCGGGACTTACGATGAGAAGAATGTTAAGTTCACACCTGATGACTTCAACAACGATGTTGGTATTGGACTCAGATATGACTATGGTATATTTTATGCATCCAAGACATTTTATGATCAGAGTAAGGGGAGGAGAGTGTTGTGGGGTTGGATTGGAGAGTCTGATAGCGAATACGCTGACGTGGCCAAAGGTTGGGCATCAGTTCAGGGTATTCCAAGAACAGTGGCACTTGATAAGAAAACTGGTAGCAACTTAATTCAATGGCCTGTGGCAGAGGTAGAGAGTTTGAGATTGAGAAGCGACGAGTTTCAAAATTTGAAGGTGAAGCCAGGGTCAGTGGTGCCACTAGAAATTGGAACAGCTGCACAGTTGGACATTGTAGCTGAGTTTGAGATAGATAAGAAGGCCTTGGAGAAGACAGGCCAGTCCAATAAAGAGTATAAGTGTAGCACTAGTGGTGGATCAACTGAGCGTGGTACCATAGGACCTTTTGGTCTTCTAGTTTTGGCAGATGATGATCTTTCTGAATACACTCCCACTTACTTTTATGTCGTCAAAGGAAGCCATGGACAACTTAAAACTTCCTTCTGCTCTGATCAATCAAGGTCTTCTCTAGCAACTGATGTTAGTAAGAAAATCTTTGGAAGCTTTGTTCCAGTACTAAAAGACGAAAAGTTGTCCGTAAGGATATTGGTGGACCATTCTATAGTGGAAAGCTTTGCTCAAGGTGGAAGGACGTGTGTAACATCTCGAGTTTATCCAACGAAGGCAATCTATGGAGCTGCTAGATTGTTTTTATTCAATAATGCTACTGAGGCCACTGTGACTGCTTCAGTTAAGGTTTGGCAAATGAATTCTGCATTCATACGCCCATTCCACCCTGACCAAAGCAATTCATTTTAA 2028 0.4448 MGSPNTRTSSSSDSELPCSNYIPVPDGPHSPAEPARREVIVIFCGLLVLVSLVAFNGYSWAHSNGHDGDHHHASSSLPTTLLTVTPNELELSPDTVPWSTWQTTLSRGVSAGVSEKSSWLFNSNNGNGESYPWNNSMLSWQRTAYHFQPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWFHLPLAMVADQWYDKNGVWTGSATILPDGQVIMLYTGSTNESMQVQNLAYPADPSDPLLVDWIKYPANPVLFPPPGIDAKDFRDPTTAWITSEGKWRISIGSKLNKTGIALVYDTNDFKTFERVEGVLHVVPGTGMWECVDFFPVSSKGENGLDTSINGENVKHVVKVSLDDDRHDYYALGTYDEKNVKFTPDDFNNDVGIGLRYDYGIFYASKTFYDQSKGRRVLWGWIGESDSEYADVAKGWASVQGIPRTVALDKKTGSNLIQWPVAEVESLRLRSDEFQNLKVKPGSVVPLEIGTAAQLDIVAEFEIDKKALEKTGQSNKEYKCSTSGGSTERGTIGPFGLLVLADDDLSEYTPTYFYVVKGSHGQLKTSFCSDQSRSSLATDVSKKIFGSFVPVLKDEKLSVRILVDHSIVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEATVTASVKVWQMNSAFIRPFHPDQSNSF 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02122 675 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 32 668 - -
Gma01g02122 675 Gene3D Glycosyl hydrolase domain; family 43 150 475 IPR023296 -
Gma01g02122 675 MobiDBLite consensus disorder prediction 1 30 - -
Gma01g02122 675 ProSitePatterns Glycosyl hydrolases family 32 active site. 146 159 IPR018053 GO:0004553|GO:0005975
Gma01g02122 675 Gene3D - 476 659 - -
Gma01g02122 675 SMART glyco_32 146 619 IPR001362 GO:0004553|GO:0005975
Gma01g02122 675 Pfam Glycosyl hydrolases family 32 C terminal 467 658 IPR013189 -
Gma01g02122 675 CDD GH32_Fruct1-like 152 452 - -
Gma01g02122 675 Pfam Beta-fructofuranosidase, N-terminal domain 20 138 IPR021792 GO:0004564
Gma01g02122 675 SUPERFAMILY Concanavalin A-like lectins/glucanases 464 663 IPR013320 -
Gma01g02122 675 MobiDBLite consensus disorder prediction 1 18 - -
Gma01g02122 675 Pfam Glycosyl hydrolases family 32 N-terminal domain 146 464 IPR013148 -
Gma01g02122 675 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 32 668 - -
Gma01g02122 675 SUPERFAMILY Arabinanase/levansucrase/invertase 139 465 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02122 Gma-Chr1 56597990 56602872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02122 1 667 Glycoside Hydrolase AT1G12240 62.206 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02122 K01193 - gmx:100798772 1364.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02122 01 56597990 56602872 Gma01g02122 01 56597990 56602872 ECH
Gma01g02122 01 56597990 56602872 Gma11g00283 11 2247933 2255619 GST
Gma01g02122 01 56597990 56602872 Gma17g01286 17 11433678 11438259 PCT
Gma01g02122 01 56597990 56602872 Gma05g00537 05 5169444 5173611 PCT