Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00283 ATGGGAAGCCACAACACAACAACCAGCTCCTCGTCTGATTCTGAACTCCCTTGTTCTAATTATATTCCGTTACCCGATGGAACCCACTTTCCCGCAGAAGAAGCTCCAAGAGAGCTGCTTGTGATCTTTTGTGGGTTGCTGGTGCTTGTGTCCTTGGTGGCCTTCAATGGCTACAGGGCGCATCCAAATGATCATCATCACGTGTCGTCATCATTGCCAACAACGTTGTTAACAGTAACACCCAATGAATTGGAACTGAGCCCCGATACAGTACCATGTTCAACATCGGAGACGACGGTTTCACGTGGCTTGTCTGCAGGGGTTTCGGAGAAGTCAAGCTGGCAATTGAACAGCAACAATGGGAGCGGGGAATCGTATCCATGGAACAATAGCGTGCTGTCATGGCAGAGAACAGCTTACCATTTCCAGCCTGAGAAGAATTGGATGAACGGTCCAATGTTCTACAAAGAGTGGTATCACTTCTTCTATCAGTACAATCCAAAGGGTGCAGTTTGGGGTGACATAGTTTGGGGACACGCTGTGTCAAGAGACATGATCCATTGGCTTCACCTTCCACTAGCAATGATGGCTGATCAATGGTATGACAAGAACGGTGTGTGGACTGGCTCTGCCACCATTTTACCCGATGGTCAAATCATTATGTTGTACACTGGTTCCACCAACGAATCAGTGCAGGTGCAAAACCTTGCATACCCTGCAGACCCCTCTGATCCTCTCCTTGTTGATTGGATCAAATACCCTGCAAATCCTGTTCTATTCCCACCACCAGGCATTGATGCCAAAGATTTTCGTGACCCCACCACTGCATGGCTCACCTCTGAAGGAAAGTGGCGCATCAGTATTGGTTCCAAGCTTAACAAAACTGGCATTGCCTTGGTTTATGATACCATTGACTTTAAGACCTTTGAGCATGTGGAGGGAGTGCTTCATGCTGTGCCAGGCACTGGCATGTGGGAGTGTGTTGACTTCTTCCCAGTTTCCAGCAAGGGTGAAAATGGCTTGAATACTTCAATCAATGGGGAGAATGTGAAGCATGTCGTAAAGGTTAGCTTGGATGATGATAGACATGATTACTATGCACTTGGGACTTATGATGAGAAGAATGTTAAGTTCACACCAGATGACTTCAAGAACGATGTTGGTATTGGACTCAGATATGACTATGGTATATTTTATGCATCCAAGACATTTTATGATCAGAGTAAGGGGAGGAGAGTGTTGTGGGGTTGGATTGGAGAGTCTGATAGTGAATATGCTGATGTGGCTAAAGGTTGGGCATCAGTTCAGGGTATTCCAAGAACAGTGACACTTGATAAGAAAACTGGTAGCAACTTACTTCAATGGCCTGTGGCAGAGGTAGAAAGTTTGAGACTGAGAAGCGAGGAATTTCAAAATTTGAAGGTGACGCCAGGGTCAGTGGTGCCACTAGAAATTGGAACAGCTGCACAGTTGGACATTGTAGCTGAGTTTGAGATAGATAAGGAAGCCTTGGAAAAGACAGGCCAATCCAATAAGGAGTACAAGTGTAGCACAAGTGGTGGAGCAACTGAACGTGGTGCCATAGGACCTTTTGGTCTTCTAGTTTTGGCAGATGATGATCTTTCTGAATACACTCCCACTTACTTTTATGTCGTCAGAGGAAGCGATGGGCAACTTAAAACTTCCTTCTGCTCCGATCAATCAAGGTCTTCTTTAGCAACTGATGTTAGCAAGAAAATCTTGGGAAGCTTAGTTCCAGTACTAAAAGACGAAAAATTGTCTGTAAGGATACTGGTGGACCATTCTATAGTGGAAAGTTTTGCTCAAGTACACAAATCTGTCATATCTTGCTGCTCGATCGTTACGATGATGGCGCTCAATTCATTGTCACCACTTTCAATTAATTCTCTTCACGTATCTTCAAGCTCAACTTCAAAGATTTCGCATTCTCATTCCAAGTCCTTTCCCGTCGTTGTGTGCCAAATTAACTCAAACAGAGATCATCGTCAAGAATCCACAAAATGGGGAAAAGTGGTTTCGGCCACGTTGGCGGCTGCTGTTATTGCCTTCAGCTCTGACATGTCTGCCCTTGCTGATCTCAACAAATTTGAGGCTGAAATGAGGGGTGAATTTGGAATAGGATCGGCTGCGCAGTTTGGCTCTGCTGACCTCAGGCTTGTTCTAAGAGCCAATTTCACAGCTGCTGATATGAGAGAATCTGATTTTAGTGGTTCAACTTTCAATGGTGCATACCTTGAGAAAGCTGTTGCATACAAGGCAAACTTTTCAGGTGCTGATTTAAGTGATACATTGATGGATCGCATGGTTCTAAATGAAGCCAATCTCACTAATGCCATTCTCCTTAGAACAGTCCTCACACGGAGTGACCTTGGGGGAGCCATCATCGAAGGTGCTGACTTTAGTGATGCTGTGTTGGATCTTCCTCAAAAGCAGGCGCTATGCAAGTATGCTAGTGGCACAAATCCTGTGACAGGAGTAAGCACAAGAGTAAGCTTAGGTTGTGGGAACAAACGACGAAATGCATATGGCTCCCCGTCATCTCCCCTTTTAAGTGCTCCACCACAGAAACTGCTTGACCGAGACGGTTTTTGTGATGATGCAACAGGACTTTGCGATGCAAAGTAG 2646 0.4528 MGSHNTTTSSSSDSELPCSNYIPLPDGTHFPAEEAPRELLVIFCGLLVLVSLVAFNGYRAHPNDHHHVSSSLPTTLLTVTPNELELSPDTVPCSTSETTVSRGLSAGVSEKSSWQLNSNNGSGESYPWNNSVLSWQRTAYHFQPEKNWMNGPMFYKEWYHFFYQYNPKGAVWGDIVWGHAVSRDMIHWLHLPLAMMADQWYDKNGVWTGSATILPDGQIIMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKYPANPVLFPPPGIDAKDFRDPTTAWLTSEGKWRISIGSKLNKTGIALVYDTIDFKTFEHVEGVLHAVPGTGMWECVDFFPVSSKGENGLNTSINGENVKHVVKVSLDDDRHDYYALGTYDEKNVKFTPDDFKNDVGIGLRYDYGIFYASKTFYDQSKGRRVLWGWIGESDSEYADVAKGWASVQGIPRTVTLDKKTGSNLLQWPVAEVESLRLRSEEFQNLKVTPGSVVPLEIGTAAQLDIVAEFEIDKEALEKTGQSNKEYKCSTSGGATERGAIGPFGLLVLADDDLSEYTPTYFYVVRGSDGQLKTSFCSDQSRSSLATDVSKKILGSLVPVLKDEKLSVRILVDHSIVESFAQVHKSVISCCSIVTMMALNSLSPLSINSLHVSSSSTSKISHSHSKSFPVVVCQINSNRDHRQESTKWGKVVSATLAAAVIAFSSDMSALADLNKFEAEMRGEFGIGSAAQFGSADLRLVLRANFTAADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAILLRTVLTRSDLGGAIIEGADFSDAVLDLPQKQALCKYASGTNPVTGVSTRVSLGCGNKRRNAYGSPSSPLLSAPPQKLLDRDGFCDDATGLCDAK 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00283 881 SMART glyco_32 141 611 IPR001362 GO:0004553|GO:0005975
Gma11g00283 881 Pfam Pentapeptide repeats (8 copies) 730 769 IPR001646 -
Gma11g00283 881 Pfam Pentapeptide repeats (8 copies) 777 811 IPR001646 -
Gma11g00283 881 SUPERFAMILY Concanavalin A-like lectins/glucanases 456 614 IPR013320 -
Gma11g00283 881 CDD GH32_Fruct1-like 147 444 - -
Gma11g00283 881 SUPERFAMILY Arabinanase/levansucrase/invertase 134 457 IPR023296 -
Gma11g00283 881 Pfam Glycosyl hydrolases family 32 C terminal 459 616 IPR013189 -
Gma11g00283 881 SUPERFAMILY Pentapeptide repeat-like 728 812 - -
Gma11g00283 881 Gene3D - 715 842 - -
Gma11g00283 881 Pfam Beta-fructofuranosidase, N-terminal domain 20 133 IPR021792 GO:0004564
Gma11g00283 881 Gene3D Glycosyl hydrolase domain; family 43 145 467 IPR023296 -
Gma11g00283 881 Gene3D - 468 619 - -
Gma11g00283 881 Pfam Glycosyl hydrolases family 32 N-terminal domain 141 456 IPR013148 -
Gma11g00283 881 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 34 618 - -
Gma11g00283 881 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 34 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00283 Gma-Chr11 2247933 2255619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00283 1 616 Glycoside Hydrolase AT1G12240 59.688 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00283 K01193 - gmx:100805757 1233.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00283 11 2247933 2255619 Gma11g00283 11 2247933 2255619 ECH
Gma01g02122 01 56597990 56602872 Gma11g00283 11 2247933 2255619 GST
Gma11g00283 11 2247933 2255619 Gma17g01286 17 11433678 11438259 PCT
Gma11g00283 11 2247933 2255619 Gma05g00537 05 5169444 5173611 PCT