Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01170 ATGGTAGATAATTTGCAGCGTTATGGAGTAATCATATCTAGAAAGGTAGCTGAAGTAATGGAAACCATAGATAGAGCTTTGTTTGTACCCAGCGGCGGCGGACTCCAACCTTATTTTCTGGAGAAGAATTTGCAACCTGGAATGGGTGTTCTTGATGTTGGCTCCGGAACGGGATACCTGACTGCATGCTTTGCCTTGATGGTTGGACCCGAAGGCCGTGCTATTGGTGTGGAACATATTCCTGAATTGGGTTCTTTTTCAATTGAAAATATTAAAAAAAGTGCTGCAGCTCAACCATTGAAAGATGGTTCCCTTTCTGCTATAATTTCTGTCGATCTGAAACATTGA 348 0.4224 MVDNLQRYGVIISRKVAEVMETIDRALFVPSGGGLQPYFLEKNLQPGMGVLDVGSGTGYLTACFALMVGPEGRAIGVEHIPELGSFSIENIKKSAAAQPLKDGSLSAIISVDLKH 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01170 115 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 95 IPR029063 -
Gma17g01170 115 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 40 97 - -
Gma17g01170 115 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 1 38 - -
Gma17g01170 115 Gene3D Vaccinia Virus protein VP39 1 109 IPR029063 -
Gma17g01170 115 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 1 39 IPR000682 GO:0004719|GO:0036211
Gma17g01170 115 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 39 109 IPR000682 GO:0004719|GO:0036211
Gma17g01170 115 PANTHER L-ISOASPARTATE METHYLTRANSFERASE 1 39 - -
Gma17g01170 115 PANTHER L-ISOASPARTATE METHYLTRANSFERASE 39 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01170 Gma-Chr17 10221848 10222688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01170 K00573 - gmx:100527082 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01170 17 10221848 10222688 Gma17g01170 17 10221848 10222688 ECH
Gma17g01170 17 10221848 10222688 Gma05g00412 05 3879206 3881797 GST
Gma17g01170 17 10221848 10222688 Gma04g01846 04 48546947 48549750 PCT
Gma17g01170 17 10221848 10222688 Gma06g01563 06 15201138 15202747 PCT
Gma04g01846 04 48546947 48549750 Gma17g01170 17 10221848 10222688 PCT
Gma06g01563 06 15201138 15202747 Gma17g01170 17 10221848 10222688 PCT