Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01846 ATGAGGGTGCAGTACCACTACTACCCTTTCCCTTCTCTGGCGTATGGTTGCAGCTACTGTTATGCTTATGCGACTACTAAATTAAAACCTACTCACTCACTCTCTCTAACACTCTCCAACCACCGTCGCATTTCTGCGTCACAACCTCACTCTTCCACCTTCTCCATCATCACCAACCTCTTCTTCTTCCAAAACCCTAATTTCATCACGGGGAACACTCTCTTCCTCAGGATGCAGAGATTTTGCTCAGTAAGTGGCTTAAGTAAGAACAAAGCACTGGTGGAGAGGTTGCAGCGCTATGGAGTGATCACATCAAGTAAGGTGGCTGAAGTGATGGAGACAGTTGATAGAGCCTTGTTTGTACCAGATGGAGCTGCACCTTATGATGACAGCCCCATGGCCATAGGGTACAATGCCACTATCTCTGCGCCGCATATGCATGCCATGTGTCTTCAGTTGCTTGAGGAGAATTTGCAGCCTGGGATGCATGCTCTGGATGTTGGCTCTGGAACGGGGTACCTGACTGCATGCTTTGCCTTGATGGTTGGGCCCCAAGGCCGTGCTGTTGGTGTGGAGCATATTCCTGAGTTGGTGTCTTTTTCAATAGAGAATATTCAGAAAAGTGCTGCAGCTGCACAATTGAAAGATGGTTCCCTTTCTGTCCATGCTGGTGATGGAAGGCAAGGTTGGCCAGAGTTTGCCCCTTATGATGCCATTCACGTTGGAGCAGCAGCACCAGAAATTCCCCAACCACTTATTGACCAGTTGAAGCCTGGAGGGAGAATGGTGATTCCTGTCGGAAACATATTCCAAGATTTAAAGGTGGTGGATAAGAATTCTGATGGTTCTATCAGTGTCCGCACTGAGACATCTGTTCGTTATGTACCCCTCACCAGTCGAGAAGCTCAACTGCGAGGTTACTAA 924 0.4816 MRVQYHYYPFPSLAYGCSYCYAYATTKLKPTHSLSLTLSNHRRISASQPHSSTFSIITNLFFFQNPNFITGNTLFLRMQRFCSVSGLSKNKALVERLQRYGVITSSKVAEVMETVDRALFVPDGAAPYDDSPMAIGYNATISAPHMHAMCLQLLEENLQPGMHALDVGSGTGYLTACFALMVGPQGRAVGVEHIPELVSFSIENIQKSAAAAQLKDGSLSVHAGDGRQGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNSDGSISVRTETSVRYVPLTSREAQLRGY 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01846 307 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 89 301 - -
Gma04g01846 307 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 224 239 IPR000682 GO:0004719|GO:0036211
Gma04g01846 307 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 9 307 - -
Gma04g01846 307 CDD AdoMet_MTases 165 266 - -
Gma04g01846 307 Gene3D Vaccinia Virus protein VP39 84 307 IPR029063 -
Gma04g01846 307 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Gma04g01846 307 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 90 275 IPR029063 -
Gma04g01846 307 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 9 307 IPR000682 GO:0004719|GO:0036211
Gma04g01846 307 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 88 303 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01846 Gma-Chr4 48546947 48549750 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01846 K00573 - gmx:100810913 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01846 04 48546947 48549750 Gma04g01846 04 48546947 48549750 ECH
Gma04g01846 04 48546947 48549750 Gma06g01563 06 15201138 15202747 GST
Gma17g01170 17 10221848 10222688 Gma04g01846 04 48546947 48549750 PCT
Gma05g00412 05 3879206 3881797 Gma04g01846 04 48546947 48549750 PCT
Gma04g01846 04 48546947 48549750 Gma17g01170 17 10221848 10222688 PCT
Gma04g01846 04 48546947 48549750 Gma05g00412 05 3879206 3881797 PCT