Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01563 ATGCAGCGATTTTGCTCATTGAGTGGCATGAGTAATAACAAAGCACTGGTGGAGAGGTTGCAGCGCTATGGAGTGATCACATCAAGTAAGGAGGCTGAAGTGATGGAGACAGTTGATAAAGCCTTGTTTGTACCAGATGGAGCTGCACCTTATGATGACAGCCCCATGGCCATAGGGTACAATGCCACTATATCTGCGCCGCATATGCTGGAGGAAAATTTGCAGCCTGGGATGCATGCTTTGGACGTTGGCTATGGTATATGCTCCATCAACCTCTTCACAATTTCAACATTTGGACCTATTTGCAGGAACGGGGTACCTGACTGCTGCTTTGCCTTAATGGTTGGACCCCATGGCCGTGCTGTTGAATATTCAGAAAAGTGCTGCAGCTGCCAATTGAAAGAGGGTTCCCTTTCTGTCCATGCTGGTGATGGAAGGCAAGGTTGGCCAGAGTTTGCACCTTATGATGCCATTCACGTTGGAGCAGCAGCACCAGAAATTCCCCAACCACTTATTGACCAGTTGAAGCCTGGAGGAAGAATGTTGAGTCCTGTTGGAAACATTTTTCAAAGGTGGTGGATAATGCTCAACTGCGAGGTTACTAAAATAGAACCAAAATCCTGA 624 0.4712 MQRFCSLSGMSNNKALVERLQRYGVITSSKEAEVMETVDKALFVPDGAAPYDDSPMAIGYNATISAPHMLEENLQPGMHALDVGYGICSINLFTISTFGPICRNGVPDCCFALMVGPHGRAVEYSEKCCSCQLKEGSLSVHAGDGRQGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMLSPVGNIFQRWWIMLNCEVTKIEPKS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01563 207 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 2 195 - -
Gma06g01563 207 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 191 - -
Gma06g01563 207 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 143 158 IPR000682 GO:0004719|GO:0036211
Gma06g01563 207 Gene3D Vaccinia Virus protein VP39 9 204 IPR029063 -
Gma06g01563 207 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 2 195 IPR000682 GO:0004719|GO:0036211
Gma06g01563 207 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 191 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01563 Gma-Chr6 15201138 15202747 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01563 K00573 - gmx:100810913 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01563 06 15201138 15202747 Gma06g01563 06 15201138 15202747 ECH
Gma04g01846 04 48546947 48549750 Gma06g01563 06 15201138 15202747 GST
Gma17g01170 17 10221848 10222688 Gma06g01563 06 15201138 15202747 PCT
Gma05g00412 05 3879206 3881797 Gma06g01563 06 15201138 15202747 PCT
Gma06g01563 06 15201138 15202747 Gma17g01170 17 10221848 10222688 PCT
Gma06g01563 06 15201138 15202747 Gma05g00412 05 3879206 3881797 PCT