Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00412 ATGGAGCAATACTGGTCTGGGAGTGCCATCAATGAAAACAAAGGAATGGTAGATAATTTGCATCGTTATGGAGTAATCACATCTAGAAAGGTAGCTGAAGTAATGGAAACCATTGATAGAGCTTTGTTTGTACCCAGCGGCGGCGGACTCCAACCTTATGTGGACAGTCCTATGCCGATTGGCTACAATGCCACCATCTCTGCGCCGCATATGCATGCCACCTGCCTTCAGTTGCTTGAGAAGAATTTGCAACCTGGAATGCGTGTTCTTGACGTTGGCTCCGGAACGGGATACCTGACAGCATGCTTTGCCTTGATGGTTGGACCCCAAGGCCGTGCTATTGGCGTGGAACATATTCCTGAGTTGGTTTCTTTTTCAATCGAGAATATTCAAAAAAGTGCTGCAGCTCAACCATTGAAAGATGGTTCCCTTTCTGTGCATGCTGGTGATGGAAGGCAAGGTTGGCCTGAGTTTGCTCCTTATGATGCCATTCACGTTGGAGCAGCGGCACCCGAAATCCCCCAACCACTTATTGACCAGTTGAAGCCGGGTGGTAGGATGGTTATTCCTGTTGGAAACATATTTCAAGATTTAAAGGTCGTGGATAAGAACTCCGATGGTTCTATCAGTATCCGGACTGAGACTTCTGTTCGATATGTTCCTCTCACTAGCAAAGAAGCTCAACTGCGAGGTTAG 696 0.4713 MEQYWSGSAINENKGMVDNLHRYGVITSRKVAEVMETIDRALFVPSGGGLQPYVDSPMPIGYNATISAPHMHATCLQLLEKNLQPGMRVLDVGSGTGYLTACFALMVGPQGRAIGVEHIPELVSFSIENIQKSAAAQPLKDGSLSVHAGDGRQGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNSDGSISIRTETSVRYVPLTSKEAQLRG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00412 231 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 4 231 - -
Gma05g00412 231 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 223 IPR029063 -
Gma05g00412 231 CDD AdoMet_MTases 88 191 - -
Gma05g00412 231 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 149 164 IPR000682 GO:0004719|GO:0036211
Gma05g00412 231 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 12 228 IPR000682 GO:0004719|GO:0036211
Gma05g00412 231 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 226 - -
Gma05g00412 231 Gene3D Vaccinia Virus protein VP39 5 231 IPR029063 -
Gma05g00412 231 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 4 231 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00412 Gma-Chr5 3879206 3881797 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00412 K00573 - gmx:100527082 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00412 05 3879206 3881797 Gma05g00412 05 3879206 3881797 ECH
Gma17g01170 17 10221848 10222688 Gma05g00412 05 3879206 3881797 GST
Gma05g00412 05 3879206 3881797 Gma04g01846 04 48546947 48549750 PCT
Gma05g00412 05 3879206 3881797 Gma06g01563 06 15201138 15202747 PCT
Gma04g01846 04 48546947 48549750 Gma05g00412 05 3879206 3881797 PCT
Gma06g01563 06 15201138 15202747 Gma05g00412 05 3879206 3881797 PCT