Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01099 ATGAGCTGGTCTGGAGGAGATTGGATGTGTGGTGTTTGTGAACACATAAATTTCAAGAAGAGGGAAGCATGCCAGAGTTGTGGATACCCCAAGTATGGTGGCCATGACCCTTCAACCTACAGATACAACAAGACTGAAGCATTAGCAGGGGACTGGTTCTGCAACTGTGGAGCTCACAACTATGCCAGTAGATCAAGCTGCTATAGATGTGGTGCAATCAAAGACTATTACTCTTCTAGAGAATATGGATCTGACACTTTCCCCCCAGGATGGAAGAATGGAGACTGGCTTTGCCCAAGAATCGGCTGTGGAGTACATAATTATGCTAGCAGGAAAGAATGCTTCAAATGCAAAGTGCCAAGGGATTTAGACTGA 375 0.4533 MSWSGGDWMCGVCEHINFKKREACQSCGYPKYGGHDPSTYRYNKTEALAGDWFCNCGAHNYASRSSCYRCGAIKDYYSSREYGSDTFPPGWKNGDWLCPRIGCGVHNYASRKECFKCKVPRDLD 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01099 124 ProSitePatterns Zinc finger RanBP2-type signature. 96 117 IPR001876 -
Gma17g01099 124 SUPERFAMILY Ran binding protein zinc finger-like 86 122 IPR036443 -
Gma17g01099 124 ProSiteProfiles Zinc finger RanBP2 type profile. 4 33 IPR001876 -
Gma17g01099 124 SUPERFAMILY Ran binding protein zinc finger-like 47 76 IPR036443 -
Gma17g01099 124 SMART zf_4 50 73 IPR001876 -
Gma17g01099 124 SMART zf_4 6 30 IPR001876 -
Gma17g01099 124 SMART zf_4 94 120 IPR001876 -
Gma17g01099 124 ProSiteProfiles Zinc finger RanBP2 type profile. 92 123 IPR001876 -
Gma17g01099 124 Pfam Zn-finger in Ran binding protein and others 92 121 IPR001876 -
Gma17g01099 124 Pfam Zn-finger in Ran binding protein and others 49 72 IPR001876 -
Gma17g01099 124 Pfam Zn-finger in Ran binding protein and others 6 32 IPR001876 -
Gma17g01099 124 PANTHER ZINC FINGER PROTEIN 1 123 - -
Gma17g01099 124 ProSitePatterns Zinc finger RanBP2-type signature. 8 27 IPR001876 -
Gma17g01099 124 PANTHER ZINC FINGER, RANBP2-TYPE-RELATED 1 123 - -
Gma17g01099 124 SUPERFAMILY Ran binding protein zinc finger-like 2 34 IPR036443 -
Gma17g01099 124 Gene3D - 1 34 - -
Gma17g01099 124 Gene3D - 41 75 - -
Gma17g01099 124 Gene3D - 87 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01099 Gma-Chr17 9407418 9409233 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01099 - - gmx:100794904 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01099 17 9407418 9409233 Gma08g01926 08 17313630 17315527 ECH
Gma17g01099 17 9407418 9409233 Gma04g00633 04 5801733 5803055 ECH
Gma17g01099 17 9407418 9409233 Gma17g01099 17 9407418 9409233 ECH
Gma17g01099 17 9407418 9409233 Gma06g01958 06 23047412 23048620 PCT