Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00633 ATGAGCAGACCAGGAGATTGGAACTGCAGGACATGCAACCACCTGAACTTCCAGAGAAGAGAGTCGTGCCAGCGATGCGGGGAGCCTAGGAGTGGTGGCGGCGGCGACTACGGCGGAGGCTTCGGTGGTGGCAGAGGCTCTTCCTCCTTTGGCTTCACCACTGGCCCGGATGTTCGCCCCGGTGACTGGTACTGCACCGTCGGAAACTGTGGAGCCCACAACTTCGCCAGCCGCTCCAGCTGCTTCAAGTGCGGTGCCCCCAAGGAGGACTCCTCCGCCGGACCATTCGACGCCGACATGCCTCGAATGAGACCATACGGCTTCGGCGGCGGCTCCTCCGCCCGTCCTGGCTGGAAGTCCGGCGACTGGATATGCACCAGGTCTGGATGCAACGAGCATAACTTCGCCAATAGAATGGAGTGTTACCGATGCAATGCACCGAGGGACTCTAGTAGTGCCAGGTCTCCCTATTCATCGTAG 480 0.6083 MSRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGGGDYGGGFGGGRGSSSFGFTTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAGPFDADMPRMRPYGFGGGSSARPGWKSGDWICTRSGCNEHNFANRMECYRCNAPRDSSSARSPYSS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00633 159 ProSiteProfiles Zinc finger RanBP2 type profile. 59 90 IPR001876 -
Gma04g00633 159 SUPERFAMILY Ran binding protein zinc finger-like 2 32 IPR036443 -
Gma04g00633 159 ProSitePatterns Zinc finger RanBP2-type signature. 63 84 IPR001876 -
Gma04g00633 159 Gene3D - 2 33 - -
Gma04g00633 159 Gene3D - 112 151 - -
Gma04g00633 159 Gene3D - 54 91 - -
Gma04g00633 159 Pfam Zn-finger in Ran binding protein and others 119 148 IPR001876 -
Gma04g00633 159 Pfam Zn-finger in Ran binding protein and others 3 30 IPR001876 -
Gma04g00633 159 Pfam Zn-finger in Ran binding protein and others 59 90 IPR001876 -
Gma04g00633 159 SUPERFAMILY Ran binding protein zinc finger-like 112 151 IPR036443 -
Gma04g00633 159 ProSitePatterns Zinc finger RanBP2-type signature. 123 144 IPR001876 -
Gma04g00633 159 SUPERFAMILY Ran binding protein zinc finger-like 55 91 IPR036443 -
Gma04g00633 159 PANTHER RAN BP2/NZF ZINC FINGER-LIKE SUPERFAMILY PROTEIN 1 152 - -
Gma04g00633 159 ProSiteProfiles Zinc finger RanBP2 type profile. 119 150 IPR001876 -
Gma04g00633 159 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Gma04g00633 159 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Gma04g00633 159 SMART zf_4 121 147 IPR001876 -
Gma04g00633 159 SMART zf_4 5 29 IPR001876 -
Gma04g00633 159 SMART zf_4 61 87 IPR001876 -
Gma04g00633 159 PANTHER ZINC FINGER PROTEIN 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00633 Gma-Chr4 5801733 5803055 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00633 - - gmx:100811107 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00633 04 5801733 5803055 Gma04g00633 04 5801733 5803055 ECH
Gma17g01099 17 9407418 9409233 Gma04g00633 04 5801733 5803055 ECH
Gma05g00084 05 808876 809699 Gma04g00633 04 5801733 5803055 ECH
Gma06g01958 06 23047412 23048620 Gma04g00633 04 5801733 5803055 ECH