Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01926 ATGAGCAGGCCAGGAGACTGGAATTGCAGGTCGTGCCAGCACCTGAACTTTCAGAGGAGAGACTCATGCCAGCGATGTGGGGACTCAAAATATGGAGATAGAGTTGTTGATTTTGGTGGTTTTGGAGGAAGAGGAGGGTCCTCATTTGGTTTAACTGGCTCAGATGTTCGCCCCGGCGACTGGTACTGTGCTGCTGCTAACTGTGGTGCACACAACTTTGCTAGCCGCTCAAGCTGCTTCAAGTGTGGTGCTTTCAAGGATGACTTGGCTGGAGGAGGCTATAACAGTTCTGACATCTTGCGCTCCAGAGCTTTTGGTGGCAGTGGAAGACCTGGATGGAAATCTGGTGATTGGATATGCAGCAGATCAGGATGCAATGAGCACAACTTTGCTAGCAGAATGGAATGTTTTAAATGCAGTGCTCCCAGGGACACGTACTAG 441 0.5011 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRVVDFGGFGGRGGSSFGLTGSDVRPGDWYCAAANCGAHNFASRSSCFKCGAFKDDLAGGGYNSSDILRSRAFGGSGRPGWKSGDWICSRSGCNEHNFASRMECFKCSAPRDTY 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01926 146 PANTHER BNAA03G57490D PROTEIN 1 145 - -
Gma08g01926 146 SUPERFAMILY Ran binding protein zinc finger-like 108 144 IPR036443 -
Gma08g01926 146 SUPERFAMILY Ran binding protein zinc finger-like 2 33 IPR036443 -
Gma08g01926 146 SMART zf_4 5 29 IPR001876 -
Gma08g01926 146 SMART zf_4 116 142 IPR001876 -
Gma08g01926 146 SMART zf_4 59 85 IPR001876 -
Gma08g01926 146 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Gma08g01926 146 ProSiteProfiles Zinc finger RanBP2 type profile. 57 88 IPR001876 -
Gma08g01926 146 ProSitePatterns Zinc finger RanBP2-type signature. 61 82 IPR001876 -
Gma08g01926 146 ProSiteProfiles Zinc finger RanBP2 type profile. 114 145 IPR001876 -
Gma08g01926 146 ProSitePatterns Zinc finger RanBP2-type signature. 118 139 IPR001876 -
Gma08g01926 146 Gene3D - 110 145 - -
Gma08g01926 146 Gene3D - 2 32 - -
Gma08g01926 146 Gene3D - 52 88 - -
Gma08g01926 146 SUPERFAMILY Ran binding protein zinc finger-like 52 87 IPR036443 -
Gma08g01926 146 Pfam Zn-finger in Ran binding protein and others 57 84 IPR001876 -
Gma08g01926 146 Pfam Zn-finger in Ran binding protein and others 114 143 IPR001876 -
Gma08g01926 146 Pfam Zn-finger in Ran binding protein and others 3 28 IPR001876 -
Gma08g01926 146 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Gma08g01926 146 PANTHER ZINC FINGER PROTEIN 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01926 Gma-Chr8 17313630 17315527 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01926 - - gmx:100527535 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01099 17 9407418 9409233 Gma08g01926 08 17313630 17315527 ECH
Gma05g00084 05 808876 809699 Gma08g01926 08 17313630 17315527 ECH
Gma06g01958 06 23047412 23048620 Gma08g01926 08 17313630 17315527 ECH
Gma08g01926 08 17313630 17315527 Gma08g01926 08 17313630 17315527 ECH