Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00896 ATGAAAAGAGGGAACAATTTGGTCGCATTGAGCAGACAACGATCCATTCAGATTCTCATCGCCATTGCGTTCTTGTACGTCCTCTTCTTCACCCTCGAAATCCCCCTCGTCTTCAGAATCGCCCAAAAACAACGACCCACTCACACCCGCCGTCAACTCGTTCGCCGCCAAAACGGCGTCGTCTCCGCCTTGATCCTAAACGACGCCGCGTTCGATTCGGAGCTCTACCAATCCTCCTGCCGCGCCGGAAAAGCCATCTGGGAAGAACTAAAACTAAAATCACGGAGCCCGCGAGGCCTCATTTCTAAGCCCGAGAACCGATCTGGGCCGTGCCCGGGATCCGTCTCCGTGTCCGGGCCCGAGTTTCTGGGCCGCGGGAGTTTGATGATGATTCCGTGTGGGCTTACGTTGGGTTCCCACGTAACGGTGGTTGGGAAGCCGTCAAGGGTGCAACGGAAGACGTGTCAGTTCGTGATGGAGTTGCTGGGGCTGAAGACGGTGGAGGGTGAGGAACCGCCCAGGGTGCTACATTTCAACCCTAGGTTGAAAGGGGATTGGAGTTGGAAGCCCGTGATTGAACTCAACACGTGTTACCGCATGCATTGGGGTACTGCCTTGCGATGTGATGGTTGGAAATCCAGAGCTGGTGAAGATACTGTTGATGGGTTGTTGAAGTGTGAGAAGTGGATTAGGGGTGATGAAGATAATAGGGATGCAGTGGAGACCAAGGCAGCGTGGTGGTTGAAGAGATTGATAGGGCGAACAAAACGAGTAAATGTTGACTGGCCATTTCCATTTTCTGAGAACAAGCTATTTATTCTTACTCTTAGTGCTGGATTTGAGGGTTTCCATATTAATGTTGATGGGAGGCATGTGACCTCTTTTCCTTATCGCACTGGATTTACTCTTGAGGATGCCACTGGTCTTACTTTGAGTGGGGACATTGATGTCCATTCTGTATTTGCTGCTTCTTTGCCTTCGGTGCATCCTAATGTTTCTTCGCAGCAGCATCTTGAATTTTCAACCAGATGGCGTGCGCCAAATCTTCCTCGCTATGGTGTGGAATTGTTTGTAGGGATCCTTTCAGCTGGAAACCATTTTGCTGAGCGGATGGCTGTGAGGAAGTCATGGATGCAGCATAGCTTTATCAAATCTTCTAAAGTGGTCACTCGTTTCTTTGTAGCACTGCACCCGAGGAAAGAAATTAATGTGGAGTTAAAGAAGGAAGCAGAATATTTTGGTGATATTGTTATAGTTCCTTACATTGATAACTATGACCTTGTTGTGTTGAAAACGATGGCCATATGTGAATATGGGGTTCACACAGTTTCTGCGGAGTATATCATGAAAGGTGATGATGACACTTTTGTAAAAATTGATGCTGTTATGAATCAAGCAAGGAATGTTCCACGTTCTATGAGCTTTTATATTGGGAACATTAATTACCGACACAAACCCTTGCGCTGGGGTAAATGGGCTGTGACATATAAGGAGTGGCCAGAAGAGGAATACCCACCCTATGCAAATGGACCGGGTTATATTTTGTCTTCTGATATTGCACACTACATTATATCTGAATTTGAGATGCATAAATTAAGGTTGTTTAAGATGGAAGATGTGAGTATGGGAATGTGGGTAAAGCAATTTAACAGATCGAAACCGGTAAACTATTTGCATAGCTTCAAGTTCTGCCAATATGGTTGTGTAGAAGGCTATTACACAGCCCATTACCAATCGCCTAGGCAGATGATATGCCTGTGGGATAAATTGCAGATGAAGACAACGCCTGAGTGCTGCAACATGAGATAA 1809 0.4655 MKRGNNLVALSRQRSIQILIAIAFLYVLFFTLEIPLVFRIAQKQRPTHTRRQLVRRQNGVVSALILNDAAFDSELYQSSCRAGKAIWEELKLKSRSPRGLISKPENRSGPCPGSVSVSGPEFLGRGSLMMIPCGLTLGSHVTVVGKPSRVQRKTCQFVMELLGLKTVEGEEPPRVLHFNPRLKGDWSWKPVIELNTCYRMHWGTALRCDGWKSRAGEDTVDGLLKCEKWIRGDEDNRDAVETKAAWWLKRLIGRTKRVNVDWPFPFSENKLFILTLSAGFEGFHINVDGRHVTSFPYRTGFTLEDATGLTLSGDIDVHSVFAASLPSVHPNVSSQQHLEFSTRWRAPNLPRYGVELFVGILSAGNHFAERMAVRKSWMQHSFIKSSKVVTRFFVALHPRKEINVELKKEAEYFGDIVIVPYIDNYDLVVLKTMAICEYGVHTVSAEYIMKGDDDTFVKIDAVMNQARNVPRSMSFYIGNINYRHKPLRWGKWAVTYKEWPEEEYPPYANGPGYILSSDIAHYIISEFEMHKLRLFKMEDVSMGMWVKQFNRSKPVNYLHSFKFCQYGCVEGYYTAHYQSPRQMICLWDKLQMKTTPECCNMR 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00896 602 Pfam Galactosyltransferase 369 549 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma17g00896 602 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 5 47 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma17g00896 602 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 63 602 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma17g00896 602 SUPERFAMILY Concanavalin A-like lectins/glucanases 129 321 IPR013320 -
Gma17g00896 602 Pfam Galactoside-binding lectin 128 321 IPR001079 GO:0030246
Gma17g00896 602 Gene3D - 247 321 - -
Gma17g00896 602 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 127 323 IPR001079 GO:0030246
Gma17g00896 602 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 5 47 - -
Gma17g00896 602 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 63 602 - -
Gma17g00896 602 Gene3D - 353 597 - -
Gma17g00896 602 CDD GLECT 131 321 IPR001079 GO:0030246
Gma17g00896 602 SMART Gal_bind_lectin_2 131 322 IPR001079 GO:0030246
Gma17g00896 602 Gene3D - 127 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00896 Gma-Chr17 7619780 7623160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00896 9 602 Glycosyltransferase AT1G74800 60.122 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00896 K20843 - gmx:100798450 1229.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00305 05 2795904 2799321 Gma17g00896 17 7619780 7623160 ECH
Gma17g00896 17 7619780 7623160 Gma17g00896 17 7619780 7623160 ECH
Gma17g00896 17 7619780 7623160 Gma05g00305 05 2795904 2799321 GST
Gma17g00896 17 7619780 7623160 Gma04g01707 04 46268144 46271779 PCT
Gma17g00896 17 7619780 7623160 Gma06g01685 06 16840807 16844162 PCT
Gma04g01707 04 46268144 46271779 Gma17g00896 17 7619780 7623160 PCT
Gma06g01685 06 16840807 16844162 Gma17g00896 17 7619780 7623160 PCT