Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01685 ATGAAACGAAAGCTAGAAACCTTGGTGTGGCTAACACGAAAACGATCGATTCAGTTTCTAATCGGTGTTTTTTTCCTGTACCTCGTACTCGTTACACTCGAAATCCCGTTTGTTTTCAAAACCGACTTCGCAAGCGTGACCACCACGCGCCCCCCGAGGCTCCGAAGCGAGGAGGATTCGCTACGTAAGGAGTCCCCTGCGCGTCCTTTGAAAACGGTTTCCAACGCCGACTCGCCGAGTCAACTCGCTCACCGCCCCAACAGCAGTGTCGTTTCCGCGCTGGTGCTAAACGACGCCGCGTTCGACTCCCACGTAAACGACGGGTCGTCTGAACTCTACAAGCAAGTGAAGCACGCGCGCGAGGTTGGACGGAGTCTATGGGAACACCTCGAATCTGGAAAGCCGCTAACACGAACCGTTGCCGAGAACCGGCCCGGTTCGTGTCCCGGTTCGGTTTCGCTTTCTGGTTCGGATGTTGTTGACGTCTTGGGCGTCGTGCCGTTACCGTGTGGGCTCACATTGGGGTCCCACATAACGGTCGTTGGGAAGCCGTTGGCGGCGAAGCCCGATTTCGAGCCGAAGATAACGGTGGTGGCGGAGAACGAGCCGGTGATGGTGTCGCAATTCGTGGTGGAGTTGCAGGGGCTGAAGACCGTTGACGGTGAAGAGCCTCCTAGGGTTTTTCATTTCAACCCGAGGTTGAAGGGGGATTGGAGTGGTAAACCTGTGATTGAACTCAACACGTGTTACCGCATGCAGTGGGGTTCTGCTATTAGATGTGACGGTTGGAAATCTAAGGCCGATGATGATACCGTTGATAGGATGGTGAAGTGTGAGAAGTGGATTCGGGATGATGAAGATCACTTGGAGGGGTCTAAGGCGACATGGTGGTTGAATAGACTGATAGGGCGCACGAAGAAAGTAACTGTTGACTGGCCATTCCCGTTTTCTGAGGGGAAGCTTTTTGTTCTTACTGTTAGTGCTGGGCTGGAGGGGTATCATGTTTCTGTTGATGGGAGGCATGTGACCTCTTTTCCTTATGGCACTGGTTTTACTCTTGAGGATGCCACCGGGCTTTCGTTGACTGGAGACATTGATGTCCACTCTGTATTTGCGGCATCTTTGCCTTCATCGCATCCCAGTTTTGCCCCACAGCGGCATCTTGAATTTTCCACTAGGTGGCGTACTCAGCCACTTCCTGAGTCTGGCGTCGAATTGTTCATTGGTGTCCTCTCGGCTGGAAACCATTTTGCTGAGCGTATGGCTGTGAGGAAGTCATGGATGCAACATAGGCTCGTCAAATCTGGAGCAGTGGTTGCTCGTTTCTTTGTGGCACTGCATGCAAGACAAGAAATTAATGCAGAGTTGAAGAAGGAAGCCGAATTTTTTGGTGATATTGTTATTGTGCCTTATTTGGATAACTATGACCTTGTTGTGTTGAAAACAGTAGCCATATGTGAATATGGGGTACATACAGTTTCTGCTAAGTATGTCATGAAAGGTGATGATGACACTTTTGTTAGAGTGGATGCTGTTATCGATGAAGCAAGGAAGGTTCCAGATGGTTCAAGCTTTTATATTGGGAACATAAATTACTACCACAAACCCTTGCGCTATGGGAAATGGGCAGTGACATATGCAGAGTGGCCAGAAGAGGATTACCCACCCTATGCTAATGGCCCGGGTTATATTTTGTCATCAGATATTGCACGCTATATCGTATCTGAATTCGATATGCGTAAATTAAGGTTGTTCAAGATGGAAGATGTGAGTATGGGAATGTGGGTGGAGCAATTCAACAGCTCAAAACCAGTACACTATTCGCATAGCTTGAAGTTCTGCCAGTTTGGTTGCATAGAAGATTATTACACCGCCCATTACCAATCGCCTAGGCAGATGATGTGCCTGTGGGATAAACTGCAAAGGAATTCAAGGCCTCAATGCTGCAACATGAGATGA 1959 0.4921 MKRKLETLVWLTRKRSIQFLIGVFFLYLVLVTLEIPFVFKTDFASVTTTRPPRLRSEEDSLRKESPARPLKTVSNADSPSQLAHRPNSSVVSALVLNDAAFDSHVNDGSSELYKQVKHAREVGRSLWEHLESGKPLTRTVAENRPGSCPGSVSLSGSDVVDVLGVVPLPCGLTLGSHITVVGKPLAAKPDFEPKITVVAENEPVMVSQFVVELQGLKTVDGEEPPRVFHFNPRLKGDWSGKPVIELNTCYRMQWGSAIRCDGWKSKADDDTVDRMVKCEKWIRDDEDHLEGSKATWWLNRLIGRTKKVTVDWPFPFSEGKLFVLTVSAGLEGYHVSVDGRHVTSFPYGTGFTLEDATGLSLTGDIDVHSVFAASLPSSHPSFAPQRHLEFSTRWRTQPLPESGVELFIGVLSAGNHFAERMAVRKSWMQHRLVKSGAVVARFFVALHARQEINAELKKEAEFFGDIVIVPYLDNYDLVVLKTVAICEYGVHTVSAKYVMKGDDDTFVRVDAVIDEARKVPDGSSFYIGNINYYHKPLRYGKWAVTYAEWPEEDYPPYANGPGYILSSDIARYIVSEFDMRKLRLFKMEDVSMGMWVEQFNSSKPVHYSHSLKFCQFGCIEDYYTAHYQSPRQMMCLWDKLQRNSRPQCCNMR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01685 652 SUPERFAMILY Concanavalin A-like lectins/glucanases 165 371 IPR013320 -
Gma06g01685 652 CDD GLECT 165 371 IPR001079 GO:0030246
Gma06g01685 652 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 6 652 - -
Gma06g01685 652 SMART Gal_bind_lectin_2 168 372 IPR001079 GO:0030246
Gma06g01685 652 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 164 373 IPR001079 GO:0030246
Gma06g01685 652 MobiDBLite consensus disorder prediction 52 66 - -
Gma06g01685 652 Gene3D - 285 371 - -
Gma06g01685 652 Gene3D - 397 648 - -
Gma06g01685 652 MobiDBLite consensus disorder prediction 49 84 - -
Gma06g01685 652 Pfam Galactosyltransferase 419 599 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma06g01685 652 Pfam Galactoside-binding lectin 166 371 IPR001079 GO:0030246
Gma06g01685 652 Gene3D - 161 280 - -
Gma06g01685 652 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 6 652 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01685 Gma-Chr6 16840807 16844162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01685 4 652 Glycosyltransferase AT1G74800 62.519 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01685 K20843 - gmx:100795908 1302.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01685 06 16840807 16844162 Gma04g01707 04 46268144 46271779 ECH
Gma06g01685 06 16840807 16844162 Gma06g01685 06 16840807 16844162 ECH
Gma04g01707 04 46268144 46271779 Gma06g01685 06 16840807 16844162 GST
Gma17g00896 17 7619780 7623160 Gma06g01685 06 16840807 16844162 PCT
Gma05g00305 05 2795904 2799321 Gma06g01685 06 16840807 16844162 PCT
Gma06g01685 06 16840807 16844162 Gma17g00896 17 7619780 7623160 PCT
Gma06g01685 06 16840807 16844162 Gma05g00305 05 2795904 2799321 PCT