Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01707 ATGATGAAGCGAAAGCTAGAAACGTTGGTGTTGCTAACACGAAAACGATCGATTCAGTTTCTAATCGGTGTTTTTTTCCTCTACCTCGTACTTGTCACACTCGAACTCCCGTTTGTTTTCAGAACCGACTTCGCCACCGTGACCACCACGCGCTCCCCGAGGCTCCTAAGTGAAGAGGATTCGCTACGAAAGGACTCCCCGGCGCGTCCTTTGAAAACGGTTTCCAACGCTGACTCGCCGAGTCAACTCGCGCGCCGCCGCAGCAGCGTCGTTTCCGCGTTGGTCCTAAACGACGCCGCGTTCGGCTCCCACGTAAACAACGGGTCGTCGGAGCTCTACAAGCAAGTGAAGCACGCGCGCGAGGTTGGGCGGAGTCTCTGGGAAGACCTCGAATCTGGAAAGCCGCTAACCCGAACCGTTGCCGCTCGGGCGGCCGAGAACCGGTCCGGTTCGTGTCCCGGTTCGGTCTCGCTTTCCGGTCCGGACGTTGTTGACGTCTCGGGCGTCGTGCCGTTGCCGTGTGGGCTCACGTTGGGGTCCCACATAACGGTCGTTGGGAAGCCGTTGGAGGCTAGGCCGGATTTCGAGCCGAAGATAACGGTGGTGACGGAGGATGAGCCCGTGATGGTGTCACAGTTCGTGGTGGAGTTGCAGGGGCTAAAAACTGTTGATGGTGAAGAGCCTCCTAGGGTTTTTCACTTCAACCCTAGGTTGAAGGGGGATTGGGGTGGAAAACCTGTTATCGAACTAAACACGTGTTACCGCATGCAGTGGGGTTCTGCTCTTAGATGTGACGGTTGGAAATCTAAGGCCGATGAAGATACCGTTGATAGTATGGCAAAGTGTGAGAAGTGGATTCGGGATGATGAAGATCATTTGGAGGGATCTAAGGCGACGTGGTGGTTGAGTAGACTGATAGGGCACACGAAGAAAGTAACCATTGACTGGCCATTCCCGTTTTCTGAGGGGAAGCTGTTTGTTCTTTCTATTAGTGCTGGGTTGGAGGGGTATCATGTTTCTGTGGATGGGAGGCATGTGACCTCTTTTCCTTATCGCGCTGGTTTTACCCTTGAGGATGCCACCGGGCTTTCGTTGACAGGAGACATTGATGTCCACTCTGTATTTGCGGCGTCTTTGCCTTCATCGCATCCCAGTTTTGCCCCGCAGCGGCATCTTGAATTTTCCACCAGGTGGCGTGCTCAGCCACTTCATGACTCTGGCATCGAATTGTTCATTGGTGTCCTCTCTGCTGGAAACCATTTTGCTGAGCGGATGGCTGTGAGGAAATCATGGATGCAGCATAGGCTCATCAAATCTGGAGTAGTGGTTGCTCGTTTCTTTGTGGCACTGCATGCAAGACAAGAAATTAATGCAGAGTTGAAGAAGGAAGCAGAATTTTTTGGTGATATTGTTATAGTGCCGTATTTGGATAACTATGATCTTGTTGTGTTGAAAACAGTGGCCATATGTGAATATGGGGTACATACGGTTTCTGCTAAGTATGTCATGAAAGGTGATGATGACACTTTTGTTAGAGTGGATGCCGTTATCGATGAAGCAAGGAAGGTTCCAGATGGTACGAGCTTTTATATTGGGAATATAAATTACTACCACAAACCCTTGCGCTATGGGAAATGGGCAGTGACATATGAAGAGTGGCCAGAAGAGGATTACCCACCCTATGCTAATGGACCTGGTTATATTTTGTCATCAGATATCGCACGCTATATTGTATCTGAATTCGAAATGCATAAATTAAGGTTGTTCAAGATGGAAGATGTGAGTATGGGAATGTGGGTGGAGCAATTCAACAGCTCAAAACCAGTACACTACTCGCATAGCTTGAAGTTCTGCCAATTTGGTTGCATAGAAGACTATTACACTGCCCATTACCAATCGCCGAGGCAGATGATGTGCCTGTGGGATAAACTGCAAAGGTATTCAAGGCCTCAATGCTGCAACATGAGATGA 1971 0.4977 MMKRKLETLVLLTRKRSIQFLIGVFFLYLVLVTLELPFVFRTDFATVTTTRSPRLLSEEDSLRKDSPARPLKTVSNADSPSQLARRRSSVVSALVLNDAAFGSHVNNGSSELYKQVKHAREVGRSLWEDLESGKPLTRTVAARAAENRSGSCPGSVSLSGPDVVDVSGVVPLPCGLTLGSHITVVGKPLEARPDFEPKITVVTEDEPVMVSQFVVELQGLKTVDGEEPPRVFHFNPRLKGDWGGKPVIELNTCYRMQWGSALRCDGWKSKADEDTVDSMAKCEKWIRDDEDHLEGSKATWWLSRLIGHTKKVTIDWPFPFSEGKLFVLSISAGLEGYHVSVDGRHVTSFPYRAGFTLEDATGLSLTGDIDVHSVFAASLPSSHPSFAPQRHLEFSTRWRAQPLHDSGIELFIGVLSAGNHFAERMAVRKSWMQHRLIKSGVVVARFFVALHARQEINAELKKEAEFFGDIVIVPYLDNYDLVVLKTVAICEYGVHTVSAKYVMKGDDDTFVRVDAVIDEARKVPDGTSFYIGNINYYHKPLRYGKWAVTYEEWPEEDYPPYANGPGYILSSDIARYIVSEFEMHKLRLFKMEDVSMGMWVEQFNSSKPVHYSHSLKFCQFGCIEDYYTAHYQSPRQMMCLWDKLQRYSRPQCCNMR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01707 656 Pfam Galactosyltransferase 423 603 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma04g01707 656 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 656 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gma04g01707 656 SMART Gal_bind_lectin_2 172 376 IPR001079 GO:0030246
Gma04g01707 656 Gene3D - 405 651 - -
Gma04g01707 656 Gene3D - 165 375 - -
Gma04g01707 656 SMART galectin_3 166 377 IPR001079 GO:0030246
Gma04g01707 656 CDD GLECT 169 375 IPR001079 GO:0030246
Gma04g01707 656 MobiDBLite consensus disorder prediction 55 83 - -
Gma04g01707 656 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 7 656 - -
Gma04g01707 656 SUPERFAMILY Concanavalin A-like lectins/glucanases 169 375 IPR013320 -
Gma04g01707 656 Pfam Galactoside-binding lectin 170 375 IPR001079 GO:0030246
Gma04g01707 656 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 168 377 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01707 Gma-Chr4 46268144 46271779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01707 5 656 Glycosyltransferase AT1G74800 61.286 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01707 K20843 - gmx:100816777 1307.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01685 06 16840807 16844162 Gma04g01707 04 46268144 46271779 ECH
Gma04g01707 04 46268144 46271779 Gma04g01707 04 46268144 46271779 ECH
Gma04g01707 04 46268144 46271779 Gma06g01685 06 16840807 16844162 GST
Gma17g00896 17 7619780 7623160 Gma04g01707 04 46268144 46271779 PCT
Gma05g00305 05 2795904 2799321 Gma04g01707 04 46268144 46271779 PCT
Gma04g01707 04 46268144 46271779 Gma17g00896 17 7619780 7623160 PCT
Gma04g01707 04 46268144 46271779 Gma05g00305 05 2795904 2799321 PCT