Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00830 ATGCAATCGTTATCGTTGAGTATGAGTCTGAGGAGTAGTAGCTTAGTGAATTTTCTTTTGCTGGGTTCAGAGACGAGAGTGAGAAGCAGAAGGAGTGTCATCGTAGCGTGTGCTTCAGAGGGAGACAGTGGCAGCAGTAGCACAAGCTCGTTTCTCTCTCGGACCCAAACCTACGCTCTTCTTAAGCAACAATTGCAAGTAGCTGCTAAATCCGAGGATTACAAGGAAGCCGCTAGAATTCGAGACTCGTTGAAGCTATTTGAGGACGAGGAACCTGTTTTGCGTCTGAGGAGACTATTGAAGGAAGCAGTTGCTGAAGAGAGATTTCAGGATGCTGCTAGTTATCGTGATGAGCTAAACAAAATTGCTCCACACTCTCTTTTAAAATGTTGCAGTGATGCTACAACATTGGGAATCAGGGTTCAAGTTAGGAGTGTATATATAGAGGGCAGAAGTCAGCCTTCAAAGGGGCTATATTTCTTTGCATATAGAATAAGAATTACTAATAACTCAGAACACCCTGTTCAACTTCTTAGAAGGCATTGGATTATAACTGATGCTAATGGGAGAACGGAAAATGTCTGGGGAATTGGAGTTGTTGGTGAACAGCCATTAATACTTCCTGGGAATAGTTTTGAATACTCTTCAGCATGCCCACTGAACACACCAAATGGTAGAATGGAAGGTGATTATGAGATGATCCATGTAGAAAGAGTAGGCTCACAATCATTCAATGTGGCCATTGCCCCGTTTTCTCTCTGTCTGCTTGGAGATGATGAAGGTTGTATTATTTAA 795 0.4252 MQSLSLSMSLRSSSLVNFLLLGSETRVRSRRSVIVACASEGDSGSSSTSSFLSRTQTYALLKQQLQVAAKSEDYKEAARIRDSLKLFEDEEPVLRLRRLLKEAVAEERFQDAASYRDELNKIAPHSLLKCCSDATTLGIRVQVRSVYIEGRSQPSKGLYFFAYRIRITNNSEHPVQLLRRHWIITDANGRTENVWGIGVVGEQPLILPGNSFEYSSACPLNTPNGRMEGDYEMIHVERVGSQSFNVAIAPFSLCLLGDDEGCII 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00830 264 ProSiteProfiles UVR domain profile. 55 90 IPR001943 GO:0005515
Gma17g00830 264 ProSiteProfiles ApaG domain profile. 133 260 IPR007474 -
Gma17g00830 264 ProSiteProfiles UVR domain profile. 90 125 IPR001943 GO:0005515
Gma17g00830 264 Pfam ApaG domain 151 234 IPR007474 -
Gma17g00830 264 Hamap Protein ApaG [apaG]. 132 264 IPR023065 -
Gma17g00830 264 SUPERFAMILY ApaG-like 135 254 IPR036767 -
Gma17g00830 264 Gene3D ApaG domain 129 258 IPR036767 -
Gma17g00830 264 Pfam UvrB/uvrC motif 95 122 IPR001943 GO:0005515
Gma17g00830 264 Pfam UvrB/uvrC motif 61 88 IPR001943 GO:0005515
Gma17g00830 264 PANTHER OS05G0170800 PROTEIN 37 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00830 Gma-Chr17 7007935 7012042 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00830 - K06195 gmx:100782176 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00830 17 7007935 7012042 Gma17g00830 17 7007935 7012042 ECH
Gma17g00830 17 7007935 7012042 Gma05g00366 05 3441304 3445524 GST
Gma17g00830 17 7007935 7012042 Gma04g01787 04 47832519 47834949 PCT
Gma17g00830 17 7007935 7012042 Gma06g01616 06 15867302 15870172 PCT
Gma04g01787 04 47832519 47834949 Gma17g00830 17 7007935 7012042 PCT
Gma06g01616 06 15867302 15870172 Gma17g00830 17 7007935 7012042 PCT