Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01616 ATGATGCAGTCGTTGATGAGCATGAAGGCTTGCGTGGGTACGAGGTTACCAGTTTTAACGAACTCCGAGGCGAGTACGAGGAAGCAGCGCGTGAATTATCCGAACCGTAGGTATGGGAGAAATGTGATTGTTTCGTGCGGTTTGGAGAGGAATGGGAACGAAGGAATGGGTTCGAACGAAGGTTCGTTTAGCCATAATTACGCTATCTTGAAGCACCGGATGGAGAAAGTGGCTAAGTCCGAGTATTACGAAGAGGCTGCGAGGATTCGTGACTCGCTCAAGTGCTTCGAAGATGAGGTTCCCGTTCTGCGTCTTCGGAGATTGTTGAAGGAAGCCGTTGCTGATGAGAGGTTTCAGGACGCAGCCAGATATCGTGATGAGCTCAAAGCAATTGCTCCACATTCTCTCTTAAAATGCTCAAGTGATGCGACAACCTTGGGAATCCGTGTCCAAGTTAAGAGTGCATATATAGAGGCCAGAAGTCAGCCTTCAGAGGAGGTATATTTCTATGAATACAGAATCAGAATTACCAATAATACAAACCGCCCTGTTCAACTTCTCAGAAGGCATTGGATTATATCTGATGCTAATGGGAAAATTGAAAATATCCGGGGAATTGGAGTTGTTGGTGAACAACCAGCTATCTTTCCAAGGAGTAGTTTTGAATTCTCTTCTACATGCCCTTTAAGCACACAAAATGGTAGAATGGAAGGTGACTTTGAGATGATATATGTTGATCGAGTAGGCTCAAGAGCATTTAATGTTGCCGTTGCCCCTTTCTCACTCTCCCTACTTGGAGATGGTGAAACTACTTGA 816 0.451 MMQSLMSMKACVGTRLPVLTNSEASTRKQRVNYPNRRYGRNVIVSCGLERNGNEGMGSNEGSFSHNYAILKHRMEKVAKSEYYEEAARIRDSLKCFEDEVPVLRLRRLLKEAVADERFQDAARYRDELKAIAPHSLLKCSSDATTLGIRVQVKSAYIEARSQPSEEVYFYEYRIRITNNTNRPVQLLRRHWIISDANGKIENIRGIGVVGEQPAIFPRSSFEFSSTCPLSTQNGRMEGDFEMIYVDRVGSRAFNVAVAPFSLSLLGDGETT 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01616 271 PANTHER OS05G0170800 PROTEIN 48 269 - -
Gma06g01616 271 ProSiteProfiles UVR domain profile. 99 134 IPR001943 GO:0005515
Gma06g01616 271 Pfam ApaG domain 159 243 IPR007474 -
Gma06g01616 271 SUPERFAMILY ApaG-like 144 263 IPR036767 -
Gma06g01616 271 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 60 97 IPR036876 -
Gma06g01616 271 Gene3D ApaG domain 138 267 IPR036767 -
Gma06g01616 271 ProSiteProfiles ApaG domain profile. 142 269 IPR007474 -
Gma06g01616 271 Pfam UvrB/uvrC motif 104 131 IPR001943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01616 Gma-Chr6 15867302 15870172 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01616 - K06195 gmx:100780493 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01616 06 15867302 15870172 Gma06g01616 06 15867302 15870172 ECH
Gma04g01787 04 47832519 47834949 Gma06g01616 06 15867302 15870172 GST
Gma17g00830 17 7007935 7012042 Gma06g01616 06 15867302 15870172 PCT
Gma05g00366 05 3441304 3445524 Gma06g01616 06 15867302 15870172 PCT
Gma06g01616 06 15867302 15870172 Gma17g00830 17 7007935 7012042 PCT
Gma06g01616 06 15867302 15870172 Gma05g00366 05 3441304 3445524 PCT