Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00366 ATGCAATCCTTATCGTTAAGTATGAGTCTGAGGAGTAGTAGTTTAGCGAATTTTCTGTTGCTGAGTTCAGAGACGAGAGTGAGAAGAAGAAGAAGGAGTGTCATCGTAGCGTGTGCTTTGGAGGGAGACAGTGGTAGCAGTAGCACAAGCTCCTTTCTCTCTCGGACCCAAACCTACGCCCTTCTTAAGCAACAATTGCAAGTGGCTGCTAAATCTGAGGATTACAAGGAAGCAGCTAGAATTCGAGACTCGTTGAAGCAATTTGAGGACGAGGAGCCTGTTTTGCGTCTGAGGAGACTATTGAAGGAAGCAATTGCTGAAGAGAGATTCCAGGATGCTGCTAGTTACCGTGATGAGCTAAACAATATTGCCCCACACTCTCTTTTAAAATGTTGCAGCGATGCTACAACATTGGGAATCAGGGTTCAAGTTAGGAGTGTATATATAGAGGGCAGAAGTCAGCCTTCAAAGGGGCTATACTTCTTTGCATATAGAATAAGAATTACCAATAACTCAGACCACCCTGTTCAACTTCTTAGAAGGCATTGGATTATAACTGATGCTAATGGGAGAACGGAAAATGTCTGGGGAATTGGAGTTGTTGGTGAACAGCCATTAATACTTCCTGGAAATAGTTTTGAATACTCTTCAGCATGCCCACTGAACACACCAAATGGTAGAATGGAAGGTGATTATGAGATGATCCATTTTGAAAGAGTAGGCTCACGATCATTCAATGTGGCCATTGCCCCGTTTTCTCTCTCTCTGCTTGGAGATGATGAAGGTTGTGTTATTTGA 798 0.4311 MQSLSLSMSLRSSSLANFLLLSSETRVRRRRRSVIVACALEGDSGSSSTSSFLSRTQTYALLKQQLQVAAKSEDYKEAARIRDSLKQFEDEEPVLRLRRLLKEAIAEERFQDAASYRDELNNIAPHSLLKCCSDATTLGIRVQVRSVYIEGRSQPSKGLYFFAYRIRITNNSDHPVQLLRRHWIITDANGRTENVWGIGVVGEQPLILPGNSFEYSSACPLNTPNGRMEGDYEMIHFERVGSRSFNVAIAPFSLSLLGDDEGCVI 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00366 265 ProSiteProfiles UVR domain profile. 56 91 IPR001943 GO:0005515
Gma05g00366 265 Pfam ApaG domain 152 235 IPR007474 -
Gma05g00366 265 PANTHER OS05G0170800 PROTEIN 39 261 - -
Gma05g00366 265 ProSiteProfiles UVR domain profile. 91 126 IPR001943 GO:0005515
Gma05g00366 265 Gene3D ApaG domain 130 259 IPR036767 -
Gma05g00366 265 Hamap Protein ApaG [apaG]. 133 265 IPR023065 -
Gma05g00366 265 SUPERFAMILY ApaG-like 136 255 IPR036767 -
Gma05g00366 265 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 57 89 IPR036876 -
Gma05g00366 265 Pfam UvrB/uvrC motif 62 90 IPR001943 GO:0005515
Gma05g00366 265 Pfam UvrB/uvrC motif 96 123 IPR001943 GO:0005515
Gma05g00366 265 ProSiteProfiles ApaG domain profile. 134 261 IPR007474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00366 Gma-Chr5 3441304 3445524 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00366 - K06195 gmx:100784413 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00366 05 3441304 3445524 Gma05g00366 05 3441304 3445524 ECH
Gma17g00830 17 7007935 7012042 Gma05g00366 05 3441304 3445524 GST
Gma05g00366 05 3441304 3445524 Gma04g01787 04 47832519 47834949 PCT
Gma05g00366 05 3441304 3445524 Gma06g01616 06 15867302 15870172 PCT
Gma04g01787 04 47832519 47834949 Gma05g00366 05 3441304 3445524 PCT
Gma06g01616 06 15867302 15870172 Gma05g00366 05 3441304 3445524 PCT