Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01787 ATGATGCAGTCGTTGATGAGCATGAAGGCTTACGTGGGTACGAGGTTACCGATTTTAACGAATTCCGAGACGAGTACGAGGAAGCAGCGCGTGAATTGTCCGAACCGTAGGAATGTGATGGTTTCGTGCGGTTCGGAGAGGAATGGGAACGAAGGAATAGGTTCGAACTCAGGTTCGTTTATGTCTCCGAGCCATAATTACGCGATCTTGAAGCACCGGATGGAGAAAGCGGCCAAGTCCGAGTATTACGAAGAGGCTTCGAGGATTCGTGACTCGCTCAAGTGCTTCGAAGATGAGATTCCTGTTCTGCGTCTGAGGAGATTGTTGAAGGAAGCCGTTGCTGATGAGAGGTTTCAGGACGCAGCTAGATATCGTGATGAGCTAAAAGAAATTGCTCCACATTCTCTCTTAAAATGCTCAAGTGATGCGACAACCTTGGGAATCCGGGTCCAAGTGAAGAGTGCATATATAGAGGGCAGAAGTCAGCCTTCAGAGGAGGTATATTCCTTTGAATATAGAATCAAAATTACCAATAACACAAACCGCCCTGTTCAACTTCTCAGAAGGCATTGGATTATATCTGATGCTAATGGGAAAACTGAAAATATTTGGGGAATTGGAGTTGTTGGTGAACAGCCAGCTATCTTTCCTAGGAGTAGTTTTGAATTCTCTTCTACATGCCCATTAAGCACACAAAATGGTAGAATGGAAGGTGACTTTGAGATGATACATGTTGATCGAGTAGGCTCTAGAGCATTTAATGTCGCCATTGCCCCTTTCTCGCTCTCTCTACTAGGAGATGGTGATGGTGAAACTACTTAA 822 0.4501 MMQSLMSMKAYVGTRLPILTNSETSTRKQRVNCPNRRNVMVSCGSERNGNEGIGSNSGSFMSPSHNYAILKHRMEKAAKSEYYEEASRIRDSLKCFEDEIPVLRLRRLLKEAVADERFQDAARYRDELKEIAPHSLLKCSSDATTLGIRVQVKSAYIEGRSQPSEEVYSFEYRIKITNNTNRPVQLLRRHWIISDANGKTENIWGIGVVGEQPAIFPRSSFEFSSTCPLSTQNGRMEGDFEMIHVDRVGSRAFNVAIAPFSLSLLGDGDGETT 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01787 273 SUPERFAMILY ApaG-like 144 263 IPR036767 -
Gma04g01787 273 ProSiteProfiles UVR domain profile. 99 134 IPR001943 GO:0005515
Gma04g01787 273 ProSiteProfiles UVR domain profile. 64 99 IPR001943 GO:0005515
Gma04g01787 273 PANTHER OS05G0170800 PROTEIN 25 268 - -
Gma04g01787 273 Pfam UvrB/uvrC motif 104 131 IPR001943 GO:0005515
Gma04g01787 273 ProSiteProfiles ApaG domain profile. 142 269 IPR007474 -
Gma04g01787 273 Pfam ApaG domain 160 243 IPR007474 -
Gma04g01787 273 Gene3D ApaG domain 138 267 IPR036767 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01787 Gma-Chr4 47832519 47834949 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01787 - K06195 gmx:100799029 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01787 04 47832519 47834949 Gma04g01787 04 47832519 47834949 ECH
Gma04g01787 04 47832519 47834949 Gma06g01616 06 15867302 15870172 GST
Gma17g00830 17 7007935 7012042 Gma04g01787 04 47832519 47834949 PCT
Gma05g00366 05 3441304 3445524 Gma04g01787 04 47832519 47834949 PCT
Gma04g01787 04 47832519 47834949 Gma17g00830 17 7007935 7012042 PCT
Gma04g01787 04 47832519 47834949 Gma05g00366 05 3441304 3445524 PCT