Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01303 ATGCCACCTTCTTACTGCGTGAAGGAGAGAAAACCATGTGTGAGATGGGTCGAGAAATATTTCAAAGATTGCCTTTGCAATTTGAAAGATGAAATCTCGTTCAGCTTCGGCCTCACAAGTCTAGTGTTCTGGGGTGTGGCTGAAATTCCTCAAATAATCACCATTTTTCGTACCAAGAAAAGCCATGGAGTTTCCCTTGTCTTTCTCCTCACTTGGGTTGCTGGGGATATATGCAATTTGACGGGTTGCATTCTTGAACCAGCTACTTTGCCAACACAGTACTACACAGCTCTGCTTTACACAATCACTACGATCGTATTACTACTGCTAATCGTATACTATGACTACATCAGCAGATGGTACAAACATCGTCAGAAGGTCAACCTCAAAAGGGATCATGAAGAGGAGAAAAAGCCATTGAAGCCACCGAAACCAACTAGCAAATCTGGAATTCCAATACCAAATGGCACACCCAAGGCAGCACCTAGACAGGAGCACTATTATATGTCAGCAAGATCATTGGCTGGGAGTGGCACTCCACCCTGGGGAACCTACATGGGAGCTGCTAAAAGTGGCCCTGCAGCCATGGAATCGATCAATGACTCTTCTTCCGACAATGAAGCACCTCCTGCTTCCTCAAATAATTCTGCAACCCAAGCTATGCCAATCCCACGTTCTGTTGCTGGAAGTTATGGAACATTTCTAGCAGCTGCTGTTAATTTGCCTCTCAGGGGCAATGCTTTGAGGGAAGGATACATAGGATTTGGTGGAAGAAAACTTTTGCAGGAGTACGAGACACATAGTACATTTGGTCAATGGCTGGGATGGCTCATGGCTGCTATCTATATAAGTGGTCGTGTTCCTCAAATATGGTTGAACGTAAGTGGGTTAAATCCTTTCATGTTCGTCTTCGCATTGGTTGCTAATGTCACTTACGTGGGAAGTATTCTTGTAAGAACTACAGAATGGGAAAGAATCAAAGCTAATATGCCATGGTTATTGGATGCCGTAATTTGCGTGGCATTGGACTTCTTCATAATATCTCAGTATATCTACTATAGATGCTTTCAAAGGAGAGAAGCACGTGATGATCACAAAGAAGCTGGAAAAGCTGCTGCATCTTGA 1125 0.4373 MPPSYCVKERKPCVRWVEKYFKDCLCNLKDEISFSFGLTSLVFWGVAEIPQIITIFRTKKSHGVSLVFLLTWVAGDICNLTGCILEPATLPTQYYTALLYTITTIVLLLLIVYYDYISRWYKHRQKVNLKRDHEEEKKPLKPPKPTSKSGIPIPNGTPKAAPRQEHYYMSARSLAGSGTPPWGTYMGAAKSGPAAMESINDSSSDNEAPPASSNNSATQAMPIPRSVAGSYGTFLAAAVNLPLRGNALREGYIGFGGRKLLQEYETHSTFGQWLGWLMAAIYISGRVPQIWLNVSGLNPFMFVFALVANVTYVGSILVRTTEWERIKANMPWLLDAVICVALDFFIISQYIYYRCFQRREARDDHKEAGKAAAS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01303 374 SMART ctns 46 77 IPR006603 -
Gma16g01303 374 SMART ctns 284 310 IPR006603 -
Gma16g01303 374 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 1 374 - -
Gma16g01303 374 MobiDBLite consensus disorder prediction 196 220 - -
Gma16g01303 374 Pfam PQ loop repeat 271 322 IPR006603 -
Gma16g01303 374 Pfam PQ loop repeat 32 88 IPR006603 -
Gma16g01303 374 MobiDBLite consensus disorder prediction 131 160 - -
Gma16g01303 374 PANTHER PQ-LOOP PROTEIN/TRANSMEMBRANE FAMILY PROTEIN 1 374 - -
Gma16g01303 374 Gene3D - 35 126 - -
Gma16g01303 374 Gene3D - 270 365 - -
Gma16g01303 374 MobiDBLite consensus disorder prediction 194 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01303 Gma-Chr16 31685181 31689958 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01303 K23678 - gmx:100787660 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01303 16 31685181 31689958 Gma16g01303 16 31685181 31689958 ECH
Gma16g01303 16 31685181 31689958 Gma02g00543 02 5393572 5400960 GST
Gma01g01820 01 53794334 53799103 Gma16g01303 16 31685181 31689958 PCT
Gma11g00580 11 4869987 4874054 Gma16g01303 16 31685181 31689958 PCT
Gma16g01303 16 31685181 31689958 Gma01g01820 01 53794334 53799103 PCT
Gma16g01303 16 31685181 31689958 Gma11g00580 11 4869987 4874054 PCT