Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00580 ATGCTACCATCGTACTGCGTGAAGGAGAGTAAACCCTGTGTGGGTTGGGTTGAGAAATACTTGGGTGATTGTCTCTGCAATTTGAAAGATGAAATTTCCTTTGGCTTTGGCTTCATAAGTCTCATATGTTGGGGAGTAGCAGAAATTCCTCAGATAATAACCAACTTTCGCGCTAAGTCCAGCCATGGTGTCTCCTTAGCCTTTCTCCTCACTTGGGTCGCGGGCGACATATTCAACCTCGTTGGTTGCCATCTGGAGCCAGCCACGGTATcctACGTCCTTAATACCACTTATTATTGTGATCTACAGCTTTACACAATCACTACGATCGTGTTAGTACTTCAAAGTTTCTATTATGATTACATCTATAAATGGGGCAAGCGTCATGGGAAGATCAACACCGATGAGGCTTATAAAGAAGAAGAGAAAAAACCTTTGAGACCGAAACCAGGCCGCGACCACTCTGGGATTCCAATACAAAATGACGGACCCAAAGAAACGCCTCGACGGGATTACTACTATAGGTCAGCGAGATCTTTGGCTGCTAATGATACTCCACCATTTGGTACATACTTGAGAGCTGCTAAAAGTGTCCCTTCAGCCATTGTAATGAACGACGATTCATCTTCTGATGATGATGAGGCTCATCCACTTTCTTCTAAGAAGCCTGTAACACAGCCTAGACCCATCCCCCGTTCTGTCCCTGCCACTTATGGAACTTTTCTAGTAGCATCTATGAACTTTCCCCGGCAGGGTAATGCCTTGATGGAGGGATACAATAGATTCAATGGAAGAAAACTACTCTTGCAAGAGCACAACAGCATGCACACTGCTTTGGGTCAATGGTTAGGATGGCTCATGGCTGTTATCTACATGGGTGGCCGGCTTCCTCAAATATGGTTGAATGGCTTAAATCCTCTTATGTTCGTCTTTGCATTAATCGCCAATGCCACTTACGTGGGAAGTATTCTTGTACGAACTACCGAATGGGAAAGCATCAGAGCTAATATGCCATGGCTGTTGGATGCCATAGTTTGCGTGGCATTGGACCTATTCATAATTTTGCAGTATGCCAACTACAGATACCTTGGGAAGAAAACTGGAAGTGATGATGCTGATTATGGAGACTACTGA 1134 0.4436 MLPSYCVKESKPCVGWVEKYLGDCLCNLKDEISFGFGFISLICWGVAEIPQIITNFRAKSSHGVSLAFLLTWVAGDIFNLVGCHLEPATVSYVLNTTYYCDLQLYTITTIVLVLQSFYYDYIYKWGKRHGKINTDEAYKEEEKKPLRPKPGRDHSGIPIQNDGPKETPRRDYYYRSARSLAANDTPPFGTYLRAAKSVPSAIVMNDDSSSDDDEAHPLSSKKPVTQPRPIPRSVPATYGTFLVASMNFPRQGNALMEGYNRFNGRKLLLQEHNSMHTALGQWLGWLMAVIYMGGRLPQIWLNGLNPLMFVFALIANATYVGSILVRTTEWESIRANMPWLLDAIVCVALDLFIILQYANYRYLGKKTGSDDADYGDY 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00580 377 MobiDBLite consensus disorder prediction 136 169 - -
Gma11g00580 377 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 3 372 - -
Gma11g00580 377 Pfam PQ loop repeat 279 330 IPR006603 -
Gma11g00580 377 Pfam PQ loop repeat 32 86 IPR006603 -
Gma11g00580 377 Gene3D - 279 372 - -
Gma11g00580 377 Gene3D - 35 137 - -
Gma11g00580 377 MobiDBLite consensus disorder prediction 136 151 - -
Gma11g00580 377 PANTHER PQ-LOOP REPEAT FAMILY PROTEIN / TRANSMEMBRANE FAMILY PROTEIN 3 372 - -
Gma11g00580 377 SMART ctns 293 317 IPR006603 -
Gma11g00580 377 SMART ctns 46 77 IPR006603 -
Gma11g00580 377 MobiDBLite consensus disorder prediction 203 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00580 Gma-Chr11 4869987 4874054 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00580 K23678 - gmx:100780977 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00580 11 4869987 4874054 Gma11g00580 11 4869987 4874054 ECH
Gma01g01820 01 53794334 53799103 Gma11g00580 11 4869987 4874054 GST
Gma11g00580 11 4869987 4874054 Gma16g01303 16 31685181 31689958 PCT
Gma11g00580 11 4869987 4874054 Gma02g00543 02 5393572 5400960 PCT
Gma16g01303 16 31685181 31689958 Gma11g00580 11 4869987 4874054 PCT
Gma02g00543 02 5393572 5400960 Gma11g00580 11 4869987 4874054 PCT