Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01290 ATGAGTGGAGCAATGATATTCATCAAGGATGACATTGGAATCAGCGACACCCAACAAGAGGTTCTAGCAGGAATCTTGAACCTATGCGCATTGGTGGGGTCTTTGGCCGCAGGAAGAACCTCCGATTACATTGGTCGCCGCTACACAATCTTGTTGGCCTCACTCCTCTTCATGGTTGGTGCAATTCTCATGGGGTATGGTCCAAACTACGCAATTCTAATGCTTGGAAGGTGTGTTGGTGGTGTTGGTGTAGGCTTTGCTCTCATGATAGCACCGGTTTATTCAGCAGAGATCTCCTCTGCATCGTCAAGGGGGTTTCTAACCTCGTTACCCGAGCTTTGCATCGGCATTGGGATCTTACTTGGGTACATATCAAACTACTTCTTGGGGAAATTGACTTTGAGGCTAGGATGGAGATTGATGCTTGGTGTAGCAGCACTTCCCTCGCTCGCTTTGGCCTTGGGGATTCTGGCAATGCCAGAGTCCCCAAGGTGGTTGGCGATGCAGGGAAGGCTTGCGGACGCAAAGAACGTGTTCTTGCGTGTCTCCAACACCGAACAGGAGGCCGAACTCCGATTCGGTGAAATAAAAGTTGTGATGGGGTTTAATGATTGTGAAGTCGAGGAGAAAAATGTGAAGCCCTCTTACAAGTCTCAAGGGGAAGGGGTTTGGAAAGAGTTGCTGGTGAGACCGACGCCAAAAGTGCGTTGGATGCTGATTGCAGCCGTGGGGATTCATTTCTTCGAGCATGCAACGGGCATTGAGGCTGTGATGTTGTATAGTCCAAGAATCTTCAAGAAAGCTGGTGTCACTAGTAAAGATAAGCTTCTTCTTGCAACGGTTGGTATTGGCCTCACAAAGATCATTTTCTTGGTCTTGGCTTTGTTTTTGCTTGACAAAGTTGGTAGAAGGCGTCTTTTGCAAATCAGCACTGGGGGAATGGTTTGTGGGCTCACACTTTTGGGTTTTAGTTTGACTATGGTGGATAGTTCTAGTGAAAAGCTCTTGTGGGCTTTGAGCCTTAGCATTGGGGCCACTTATGGTTATGTTGCTTTCTTTAATGTTGGGCTTGGGCCTGTTACTTGGGTCTATGCGTCGGAGATATTTCCTTTGAAGTTGAGGGCGCAAGGGGCTAGTATAGGAGTTGCAGTGAATAGAACCATGAATGCAGTGGTTTCCATGAGTTTTATTTCGGTGTACAAAGCGATCACTATAGGTGGGAGCTTTTTCATGTTTGCTGGAATATCTATAGTGGCTTGGGTGTTCTTCTACTTTTTCCTTCCTGAAACCAAAGGCGTGCCCTTGGAAGAGATGGAGATGGTTTTCAGCAAAAAATCCAGTGGGAAAAATGTAGCAATAGAAAATGGTCCAAGATAG 1377 0.467 MSGAMIFIKDDIGISDTQQEVLAGILNLCALVGSLAAGRTSDYIGRRYTILLASLLFMVGAILMGYGPNYAILMLGRCVGGVGVGFALMIAPVYSAEISSASSRGFLTSLPELCIGIGILLGYISNYFLGKLTLRLGWRLMLGVAALPSLALALGILAMPESPRWLAMQGRLADAKNVFLRVSNTEQEAELRFGEIKVVMGFNDCEVEEKNVKPSYKSQGEGVWKELLVRPTPKVRWMLIAAVGIHFFEHATGIEAVMLYSPRIFKKAGVTSKDKLLLATVGIGLTKIIFLVLALFLLDKVGRRRLLQISTGGMVCGLTLLGFSLTMVDSSSEKLLWALSLSIGATYGYVAFFNVGLGPVTWVYASEIFPLKLRAQGASIGVAVNRTMNAVVSMSFISVYKAITIGGSFFMFAGISIVAWVFFYFFLPETKGVPLEEMEMVFSKKSSGKNVAIENGPR 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01290 458 TIGRFAM SP: MFS transporter, sugar porter (SP) family 14 438 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma16g01290 458 ProSitePatterns Sugar transport proteins signature 1. 294 311 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma16g01290 458 ProSitePatterns Sugar transport proteins signature 1. 37 54 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma16g01290 458 PANTHER POLYOL TRANSPORTER 3-RELATED 1 450 - -
Gma16g01290 458 ProSitePatterns Sugar transport proteins signature 2. 79 104 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma16g01290 458 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 431 IPR020846 GO:0022857
Gma16g01290 458 PRINTS Sugar transporter signature 74 93 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma16g01290 458 PRINTS Sugar transporter signature 249 259 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma16g01290 458 PRINTS Sugar transporter signature 343 364 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma16g01290 458 PRINTS Sugar transporter signature 366 378 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma16g01290 458 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 1 450 IPR045262 GO:0015144
Gma16g01290 458 Gene3D MFS general substrate transporter like domains 1 446 IPR036259 -
Gma16g01290 458 SUPERFAMILY MFS general substrate transporter 2 439 IPR036259 -
Gma16g01290 458 Pfam Sugar (and other) transporter 15 442 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01290 Gma-Chr16 31468337 31469713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01290 1 442 Organic Solute Cotransporters AT2G18480 71.267 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01290 - - gmx:100806930 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00526 02 5230338 5233228 Gma16g01290 16 31468337 31469713 ECH
Gma16g01290 16 31468337 31469713 Gma16g01290 16 31468337 31469713 ECH
Gma16g01290 16 31468337 31469713 Gma02g00526 02 5230338 5233228 GST
Gma11g00609 11 5062926 5065682 Gma16g01290 16 31468337 31469713 PCT
Gma16g01290 16 31468337 31469713 Gma11g00610 11 5073682 5075848 PCT