Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00609 ATGTCTACGGAAGATGATAATAACAAACCTTACCAAGTACCCAAAGAAAATTATTCAGTTAACAGTCATCGAAGACTATTTAACAAGTATGCTTGTGCTTGTGTGATGACTGCCTCGATTATATCTGCCATATTTGGTTACGTTATGGGAGTGATGGCTGGAGCACTGATATTCATAAAGGAAGATCTTCAAATCAGTGACCTACAAGTGCAGCTCCTAGCAGGCATCTTAGACGTGTTCGCAGTATCAGGAGCCATGGCTGCAGGAAGAACATCTGATTATATAGGTCGCCGCTACACCGTCATTCTAGCCTCACTCATCTTCTTGTTGGGCTCCATTCTAATGGGCTATGGCCCATCCTACTCAATCTTAATCATTGGAAGATGCATTGTTGGAATTGGTGTGGGTTTTGCATTGATCATAGTACCAGTTTACAGCACAGAGATTTCATCTCCTTCCAAGAGAGGCTTTCTCACCTCTCTCCCAGACCTTTGCATCAACTTGGGGTTCTTGCTTGGCTATGTCTCAAACTACTTGTTTGAAAAATTGCCCCTGAAACTTGGATGGAGAATAATGGTTGCTCTTCCAGCAATTCCTTCCCTCATTCTAGTCATTCTCATGTTGAATTCGGTAGAGTCTCCAAGGTGGTTAGTGATGCAAGGACGTATAGCTGAGGCCAGGAAAGTGCTTTTATTAGTCTCTAATACAAACGAAGAAGCTAAACAACGCTTGAATGAAATAGAAGTTTCTGTTGGCATTGTTGAAAACTGCACCCTAGACATTGTTCAGGTTCCAAGGGAAACTCGCAGTGGTGCAGGAGCTCTTAAGGAACTGTTTTGTAAACCTTCCCCACCTGTGCGTAGGATACTAATTGCCGCCATTGGGGTTCATGTGTTCCAGCAGAGTAGTGGAATCGAGGGTATTTTGGTATATAGCCCAAGGGTGTTTGAGAGAACAGGAATCAGTGACAAGAGCAAGCTCATGCTAGTCACTGTTGGCATGGGAATCAGCAAAACTGTGTCAACATTAGTTGCAACATTTTTGTTGGACAGAGTTGGGAGGAGGATTCTCTTTCTGGTTAGTTCAGGAGGAATGGTTGTGGCACTGTTAGGGTTAGGTGTTTGCATGACCACAGTGGAAAGTTCCACTGAGAAATTATTGTGGACAACAAGCATTGCCATAATTGCTACCTACGTTTATGTGGCTTTTATGGCTATTGGAATTGGGCCTGTGACATGGGTTTATAGCACTGAGATATTTCCTTTGAGATTGAGGGCACAAGGAATTGGCATATGCGTGGCTGTGAACAGAACTACGAATTTGGCAGTGGTCACAAGTTTCATTTCGATCTATAAAAAGATAACAATGGGTGGGATTTTCTTTCTGTTTACAGCTATTAATGCTTTGGCTTGGTGTTTCTACTACTTTTTGCCTGAGACTAAAGGAAGATCATTAGAAGATATGGAGAGTATCTTTGGGGAAAATTCCAAATCGAAGGTACAAAATGACGAAGCCAGAGAGCAACACTAG 1530 0.4255 MSTEDDNNKPYQVPKENYSVNSHRRLFNKYACACVMTASIISAIFGYVMGVMAGALIFIKEDLQISDLQVQLLAGILDVFAVSGAMAAGRTSDYIGRRYTVILASLIFLLGSILMGYGPSYSILIIGRCIVGIGVGFALIIVPVYSTEISSPSKRGFLTSLPDLCINLGFLLGYVSNYLFEKLPLKLGWRIMVALPAIPSLILVILMLNSVESPRWLVMQGRIAEARKVLLLVSNTNEEAKQRLNEIEVSVGIVENCTLDIVQVPRETRSGAGALKELFCKPSPPVRRILIAAIGVHVFQQSSGIEGILVYSPRVFERTGISDKSKLMLVTVGMGISKTVSTLVATFLLDRVGRRILFLVSSGGMVVALLGLGVCMTTVESSTEKLLWTTSIAIIATYVYVAFMAIGIGPVTWVYSTEIFPLRLRAQGIGICVAVNRTTNLAVVTSFISIYKKITMGGIFFLFTAINALAWCFYYFLPETKGRSLEDMESIFGENSKSKVQNDEAREQH 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00609 509 ProSitePatterns Sugar transport proteins signature 1. 88 105 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma11g00609 509 ProSitePatterns Sugar transport proteins signature 2. 130 155 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma11g00609 509 Pfam Sugar (and other) transporter 35 492 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma11g00609 509 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 21 497 IPR045262 GO:0015144
Gma11g00609 509 SUPERFAMILY MFS general substrate transporter 21 489 IPR036259 -
Gma11g00609 509 ProSiteProfiles Major facilitator superfamily (MFS) profile. 34 482 IPR020846 GO:0022857
Gma11g00609 509 Gene3D MFS general substrate transporter like domains 24 496 IPR036259 -
Gma11g00609 509 TIGRFAM SP: MFS transporter, sugar porter (SP) family 25 487 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g00609 509 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 21 497 - -
Gma11g00609 509 PRINTS Sugar transporter signature 42 52 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g00609 509 PRINTS Sugar transporter signature 125 144 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g00609 509 PRINTS Sugar transporter signature 300 310 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g00609 509 PRINTS Sugar transporter signature 394 415 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g00609 509 PRINTS Sugar transporter signature 417 429 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00609 Gma-Chr11 5062926 5065682 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00609 28 505 Organic Solute Cotransporters AT4G36670 52.192 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00609 - - gmx:100787395 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00609 11 5062926 5065682 Gma16g01290 16 31468337 31469713 PCT
Gma11g00609 11 5062926 5065682 Gma02g00526 02 5230338 5233228 PCT