Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g00526 ATGGACCAGGCGACCACGTTCAACAAATATGCCTTTGCTTGTGCTGCAGTTGCTTCAATGGTATCCATCATATCTGGCTATGACACGGGCGTTATGAGTGGAGCAATGATATTCATCAAGGATGACATTGGAATCAGTGACACCCAACAAGAGGTTCTAGCAGGAATCTTGAACCTATGTGCATTGGGGGGGTCCTTAGCTGCGGGAAGAACCTCCGATTATATTGGTCGTCGCTACACAATCTTGTTGGCCTCACTCCTCTTCATGGTGGGTGCAATTCTCATGGGGTATGGTCCAAACTATGCAATTCTAATGCTTGGAAGATGCATTGGTGGTGTTGGTGTAGGCTTTGCTCTCATGATAGCACCAGTTTACTCAGCAGAGATTTCTTCTGCATCATCAAGGGGTTTTCTAACCTCGTTACCCGAGCTTTGCATCGGCATTGGGATCTTACTTGGGTACATATCAAACTACTTTTTGGGGAAATTGACTTTGAGGCTGGGATGGAGATTAATGCTTGGGGTAGCAGCTTTTCCCTCGCTAGCTTTGGCCTTGGGGATTCTGGGGATGCCAGAGTCCCCAAGGTGGTTGGCAATGCAAGGTCGCCTAGGGGATGCAAAGAAAGTGTTATTGCGAGTTTCCAACACGGAACACGAGGCCAAGCTTCGGTTCAGAGAAATAAAAGTTGCAATGAGGATTAATGATTGTGATGGTGATGACAACAATGTGAAACCTTCTTACAAGTCACAAGGGGAAGGGGTGTGGAAAGAATTGCTGGTGAGGCCCACACCGGAAGTGCGTTGGATGCTAATTGCGGCAGTGGGGATTCACTTCTTTGAGCATGCAACTGGCATTGAGGCTGTGATGTTGTATAGTCCCAGAATCTTCAAGAAAGCTGGTGTCACAAGCAAGGACAAGCTTCTTCTTGCAACGGTTGGTATTGGCCTCACAAAGATCATTTTCTTGGTCATGGCTTTGTTTTTGCTTGACAAAGTTGGTAGAAGGCGTCTTTTACAAATCAGCACTGGGGGAATGGTTTGTGGGCTCACACTTTTGGGGTTTAGTTTGACCATGGTGGATCGTTCTAGTGAAAAGCTCTTGTGGGCTTTGAGCCTTAGTATTGTGGCCATTTATGCTTATGTTGCTTTCTTTAATGTTGGGCTTGGGCCTGTTACTTGGGTTTATGCGTCGGAGATTTTTCCTTTGAAGTTGAGGGCGCAAGGGGCTAGTATAGGAGTTGCGGTGAATAGAACCATGAATGCTGTGGTTTCCATGAGTTTTATTTCGGTCTACAAAGCGATCACTATAGGTGGGAGCTTTTTCATGTTTGCTGGGATATCTATAGTGGCTTGGGTGTTCTTCTACTTTTTCCTTCCTGAAACCAAAGGTGTGCCCTTGGAAGAGATGGAGATGGTTTTCAGCAAAAAATACAGTGGGAAAAATGTAGCGATAGAAACTGGTCCATGA 1467 0.4588 MDQATTFNKYAFACAAVASMVSIISGYDTGVMSGAMIFIKDDIGISDTQQEVLAGILNLCALGGSLAAGRTSDYIGRRYTILLASLLFMVGAILMGYGPNYAILMLGRCIGGVGVGFALMIAPVYSAEISSASSRGFLTSLPELCIGIGILLGYISNYFLGKLTLRLGWRLMLGVAAFPSLALALGILGMPESPRWLAMQGRLGDAKKVLLRVSNTEHEAKLRFREIKVAMRINDCDGDDNNVKPSYKSQGEGVWKELLVRPTPEVRWMLIAAVGIHFFEHATGIEAVMLYSPRIFKKAGVTSKDKLLLATVGIGLTKIIFLVMALFLLDKVGRRRLLQISTGGMVCGLTLLGFSLTMVDRSSEKLLWALSLSIVAIYAYVAFFNVGLGPVTWVYASEIFPLKLRAQGASIGVAVNRTMNAVVSMSFISVYKAITIGGSFFMFAGISIVAWVFFYFFLPETKGVPLEEMEMVFSKKYSGKNVAIETGP 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g00526 488 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 5 480 IPR045262 GO:0015144
Gma02g00526 488 TIGRFAM SP: MFS transporter, sugar porter (SP) family 8 469 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma02g00526 488 Pfam Sugar (and other) transporter 15 473 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma02g00526 488 PRINTS Sugar transporter signature 22 32 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma02g00526 488 PRINTS Sugar transporter signature 105 124 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma02g00526 488 PRINTS Sugar transporter signature 280 290 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma02g00526 488 PRINTS Sugar transporter signature 374 395 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma02g00526 488 PRINTS Sugar transporter signature 397 409 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma02g00526 488 ProSitePatterns Sugar transport proteins signature 1. 325 342 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma02g00526 488 ProSitePatterns Sugar transport proteins signature 1. 68 85 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma02g00526 488 Gene3D MFS general substrate transporter like domains 3 477 IPR036259 -
Gma02g00526 488 ProSiteProfiles Major facilitator superfamily (MFS) profile. 14 462 IPR020846 GO:0022857
Gma02g00526 488 SUPERFAMILY MFS general substrate transporter 5 470 IPR036259 -
Gma02g00526 488 PANTHER POLYOL TRANSPORTER 3-RELATED 5 480 - -
Gma02g00526 488 ProSitePatterns Sugar transport proteins signature 2. 110 135 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g00526 Gma-Chr2 5230338 5233228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g00526 2 473 Organic Solute Cotransporters AT2G18480 71.398 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g00526 - - gmx:112998708 943.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00526 02 5230338 5233228 Gma16g01290 16 31468337 31469713 ECH
Gma02g00526 02 5230338 5233228 Gma02g00526 02 5230338 5233228 ECH
Gma16g01290 16 31468337 31469713 Gma02g00526 02 5230338 5233228 GST
Gma11g00609 11 5062926 5065682 Gma02g00526 02 5230338 5233228 PCT
Gma02g00526 02 5230338 5233228 Gma11g00610 11 5073682 5075848 PCT