Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00610 ATGGAGATAGGTGGCGAAAAAGATCAGTTCAATAAATATGCTTGTGCATGTGCTGTAGTCGCTTCCATGATATCCATCATATTTGGATATGATACCGGTGTTATGAGTGGAGCCATGATATTCATAAAGGAGGAGCTCGGAATCAGCGACACCCAACAAGAAGTTCTTGCAGGAATCTTAAACCTTTGTGCCTTGGTAGGATCTTTAGCTGCAGGAAGAACCTCTGATTACATTGGTCGACGCTACACAATCGCCCTAGCCTCTGTCCTTTTCATGGGTGGTTCAATTCTCATGGGATATGGTCCAAACTACGCAATTCTAATGTTGGGAAGGTGTGTTGCTGGTATTGGCGTGGGTTTTGCTCTTTTGATAGCACCAGTTTATTCTGCTGAAATCTCCTCAGCTAAATCACGAGGCTTTCTAGCTTCCCTACCCGAGCTTTGTATTGGTATTGGAATTTTACTTGGTTACGTAGCGAACTACTTCTTAGGGAAATTGACTTTGAAGCTTGGGTGGAGATTGATGCTTGGTATTGCAGCAGTTCCTTCACTTGCTTTGGCTTTTGGCATTCTGGCAATGCCAGAATCTCCAAGGTGGTTGGTGATGCAAGGCCATTTAGGAAAAGCCAAGAAAGTTTTGTTGAAAGTTTCAAATACTGAACAAGAAGCTGATCTTCGGTTCAAGGATATAAAGATTGCTGCTGGGATTGACGAGAATTGCCCTGAGGAAATGGTTAAGCTCCCACAGAAGAACCATGGTGAAGGGGTTTGGAAAGAGTTAATAGTGAGACCCTCTAATTCTGTTCGGTGGATGTTGATTGCAGCTGTTGGGATTCACTTTTTTGAGCATGCAACTGGAATTGAAGCTGTTATGCTATATAGTCCAAGAATCTTTAAGAAAGCTGGAGTCACCACAAAGGACAAGCTCTTGCTCACAACCATTGGAGTAGGCCTCACAAAAATCTTTTTCTTGATAATAGCCTCATTTTTGCTTGACAGATTTGGGAGAAGACGCCTCTTGCTTACAAGCACCGGAGGAATGGTTTGTAGCCTTGCAGTGTTAGGATTCAGCTTGACCATGGTGCATACTTCACAGGAAAAGCTCTCATGGGCCTTGACCCTTAGCATAGTGGCTACTTACTCATTTGTTGCTTCTTTTAATATTGGACTTGGACCTGTCACATGGGTGTATAGCTCAGAGATTTTCCCTTCTAAGTTGAGAGCACAAGGAGCAAGTATTGGAGTTGCTGTCAACAGAGTCATGAATGCTGCTGTTTCCATGAGTTTCATTTCAATCTATAAAACAATAACTATAGGTGGGACTTTTTTCATGTTTGCTGCTATATCTATATTAGCTTGGTTGTTCTTCTATTTTTTCCTGCCTGAAACCAAGGGGGTGGCCTTGGAAGGGATGGAGATGGTTTTCAGCAAAAATTATAGTAGGAATGTAGCTGCAGAAACTGATCAGAGGCAGAACGCGTAA 1482 0.4265 MEIGGEKDQFNKYACACAVVASMISIIFGYDTGVMSGAMIFIKEELGISDTQQEVLAGILNLCALVGSLAAGRTSDYIGRRYTIALASVLFMGGSILMGYGPNYAILMLGRCVAGIGVGFALLIAPVYSAEISSAKSRGFLASLPELCIGIGILLGYVANYFLGKLTLKLGWRLMLGIAAVPSLALAFGILAMPESPRWLVMQGHLGKAKKVLLKVSNTEQEADLRFKDIKIAAGIDENCPEEMVKLPQKNHGEGVWKELIVRPSNSVRWMLIAAVGIHFFEHATGIEAVMLYSPRIFKKAGVTTKDKLLLTTIGVGLTKIFFLIIASFLLDRFGRRRLLLTSTGGMVCSLAVLGFSLTMVHTSQEKLSWALTLSIVATYSFVASFNIGLGPVTWVYSSEIFPSKLRAQGASIGVAVNRVMNAAVSMSFISIYKTITIGGTFFMFAAISILAWLFFYFFLPETKGVALEGMEMVFSKNYSRNVAAETDQRQNA 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00610 493 ProSitePatterns Sugar transport proteins signature 1. 71 88 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma11g00610 493 SUPERFAMILY MFS general substrate transporter 10 471 IPR036259 -
Gma11g00610 493 ProSitePatterns Sugar transport proteins signature 1. 327 344 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma11g00610 493 ProSitePatterns Sugar transport proteins signature 2. 113 138 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma11g00610 493 PANTHER POLYOL TRANSPORTER 3-RELATED 7 486 - -
Gma11g00610 493 Pfam Sugar (and other) transporter 17 475 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma11g00610 493 ProSiteProfiles Major facilitator superfamily (MFS) profile. 17 464 IPR020846 GO:0022857
Gma11g00610 493 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 7 486 IPR045262 GO:0015144
Gma11g00610 493 Gene3D MFS general substrate transporter like domains 6 479 IPR036259 -
Gma11g00610 493 TIGRFAM SP: MFS transporter, sugar porter (SP) family 12 469 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g00610 493 PRINTS Sugar transporter signature 25 35 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g00610 493 PRINTS Sugar transporter signature 108 127 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g00610 493 PRINTS Sugar transporter signature 282 292 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g00610 493 PRINTS Sugar transporter signature 376 397 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gma11g00610 493 PRINTS Sugar transporter signature 399 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00610 Gma-Chr11 5073682 5075848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00610 2 481 Organic Solute Cotransporters AT4G36670 67.635 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00610 - - gmx:102661233 957.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01290 16 31468337 31469713 Gma11g00610 11 5073682 5075848 PCT
Gma02g00526 02 5230338 5233228 Gma11g00610 11 5073682 5075848 PCT