Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01621 ATGATGTTGTCGAGAATGGAGGCTGGGAAGAAGGGTGGTGGGGGTTCTAGTAACCAGAAGAAATTGTTAAAGGATGTTGAAACCATGAACAAAGCTTTGTACTTGGATAGAACCTCTTCAAGGAGTTCAATACCTAGTGCAAATTCTAGATCTAAATTCACAGGGAAACCTCAGTTGCCTGATCCCAAATCCAAGTCTAAAGCCAGTGGTGATAATAATAGTGAGAATGTTCAGAAGGATAAGAAGTCCATATGGAATTGGAGGCCACTAAGGGCACTCTCGCACATCCGAAATAAGAGGTTCAATTGTAGTTTTTATCTCCAAGTTCATTTGATTGAGGGGTTGCCTCCGAGTTTTGATGATGCTAGCCTTGCTGTGTACTGGAAGAGGCGCGATGGGGTTCTTGTGACCCAGCCGGCCAAGGTGGTTCAGCGTGTGGCTGAATTTGAGGAGAAGTTGACCTACACTTGCTCGGTGTATGGAAGCAGGAGCGGACCTCACCATTCTGCAAAGTATGAAGCAAAGCATTTTTTGCTCTATGCTTCACTTCTCAGTGTGCCAGAGATGGATTTGGGGAAGCACCGGGTGGATCTGACGAGGTTGCTTCCTCTCACTCTGGAGGAGCTTGAGGAGGAGAAGAGCTCGGGGAAGTGGACTACTAGTTTTCGATTAACGGGAGTGGCTAAGGGTGCTGCGATGAATGTCAGTTTTGGGTATACGGTGGTTGGTGATAATGCTAGTGCTACCAGAGACAGCCTTCCTAAAGCATTGACCTCCAGGCAGCATAGTTTTGCTCCGACTCCGACAAAGTTAGATGTTAAACCCAGACAGTTTGATGGAAGCAGCAAGATGAGACGGGCCACAAGTTTGCAATACTCATCTCAAGCTGCAGATGAGGTGAAGGATCTTCATGAGGTATTGCCATTAACTAAGTCAGCACTAGCCAGCTCAATAGACGTCTTATATACAAAATTGGATGAAGAAAAGGCTTGTAGTCCTCTGGATGATGAGGCAGAACTTGATTCCTTCAATCTTGGGCCAATCAAGCCAGATGCCTATGCTTCTGATCTAGGAAAAGAAAGGCTTGAAGAGCATGCAACTAAGGATGAAAATACATGTCCAGTGGATGACAAACCTGAACCCTACGTATTTCAAGAAAAGCTGGAGACAGTTAAACCAGATGGCTATTCTTTACCAGATTTTGAAAATGAAAACCCCGAACATTGTCTTGATAATGATTTTTTTGTTGTTGATAAGGGCATAGAACTTTCATCAAACGAATCTGTTAAACTAGAGGAATCCATCATAAAGGCTCCTGACGATGCTTCTACAGTTGATAGTGCCAGTACCCTTGGTATATCAGGTATACAAATATCTTCTGAAGATAGTGTTAAGCATGATTTTCTGGATGATGCAAATGATAGTTCTAAGGATCAAGCAGTGGTAGAGGAATTTGCTAGCATAAAGGCTCCTGAGGATGCTTCTACAGTTGATGCTTCCTGTACCCTTGGTATATCAGGTATACATGTATCTTCTGAAGATAGTGTTAAACACGATTTTCTGGATGAGGCAAATGGCTTGGACACTAATGAGCTGCTCATGCAAGAACTAGAATCTGCTTTAAATAGTGTCTCAAATTTGGAGAGAGTGGCACTAGAATCTCCTAAAACTGTAGAAGCGAAATTGGAATTTAAAATGACAAAGTCACATAGCTTGGATGATGTTACAGCATCTGTTGCCACTGAATTTTTAAGCATGTTAGGCTTAGACCATAGTCAAATGGGCTTGAGTTCTGAAAGCGAGCCCGAGTCTCCAAGAGAGCTACTTTTAAGACAATTTGAGAAGGAGGCTCTGAATGGGGGCTTCTCTTCTTTGTTCGATTTTGACATGAACTATGATAATGAAGCAGATGGTGGCTATGATGCTTCTGCTGCTTCTGAGCAGTGGAACTTTTCTGAAGGTGTCAAGTCGTCATCCTTCTTGCAAGATGATCTGCAGGAGGAGCATCCAGTTGAGTCTCAGGATGTGAGGAGCAAACAGAGGGCTCAAATGCTAGAAGACTTGGAAACAGAAGCCTTGATGCGTGAATGGGGTTTGAATGAGAAGGCTTTTCATCATTCTCCACCAAAAGATTTTGCCGGTTTTGGAAGTCCAATTCATTTACCACCTGAAGAGCCTCCCACATTGCCTCCACTTGATGATGGGTTGGGCCCTTTTCTTCAGACAAAAGACGGGGGTTTTCTACGCTCTATGAATCCCTCAATTTTCAAGAATTCTAAAAGTGGTGGGAGCTTAATCATGCAGGTATCCAACCCTGTTGTGGTACCTGCAGAAATGGGTTCTGGGATAATGGAGGTTTTGCAGTGTTTGGCTTCAGTGGGTATTGAAAAGCTCTCAATGCAGGCAAAGGAGTTAATGCCACTGGAAGATATCACAGGGAAGACAATGCAACAAATAGCATGGGAAGCTATGCCTGTCTTAGAGGGTGCGGAGAGGCAATGCCATTTGCAGCATGATCCAATAGCATGGCCAGACAGTGCTTATGTGCAAAGGGACTTGAAAGGAATGCCATCTAAACAAAAGTCTGGCAAGTTTAGTTCAAGAACAGTGGCCAACCAAACAGGCTCAGAGTTTGTTTCAGTAGAAGACCTTGCTCCATTGGCTATGGATAAAATTGAAGCACTTTCAATGGAGGGTTTGAGAATCCAATCTGGGATGTCAGAAGAGGAAGCACCGTCAAACATCATTGCTCAGTCCATTGGAGATATTTCAGCTCTCCAAGGCAAGGGGGTTGATGTTAGTGGGTCCCTTGGCCTGGATGGAGCTGCTGGTTTGCAGTTGATGGATGTAAAGGACAGTGATGATGGTGGTGATGGTGTTGATGGGATAATGAGCCTATCATTAACTCTTGATGAATGGATGAAGCTGGATTCTGGTGAGATTGATGATATAGATAATATCAGTGAGCACACTTCCAAACTTCTTGCAGCCCATCATGCCAACTCTTTTGACTTCATTCGTGGGAGTTCAAAGGGAGAGAAGAGACGAGGCAAAAGCAGAAGATGTGGTTTGCTAGGAAACAATTTCACAGTAGCATTAATGGTGCAACTCCGTGATCCTCTGAGAAACTATGAGCCGGTTGGAACACCAATGCTTGCTCTTATACAAGTTGAGAGAGAGTTCATGCTTCCAAAGCAAAGAATTTTCGACAGTGTGTCTGAGATTAGGAAAAACTATGATGAGGATGACGAGAGCGAAATAGTAGCAAAGGTGGAAATGAAGGACACTGAGAAAGAGGAGAAAAGTTCTGAGGAGGACGAGGGCATTCCTCAGTTCAGAATCACTGAAGTCCATGTGGCAGGTCTAAAGCCTGAGCCTCAGAAAAAGAAGCTCTGGGGCACTTCAAGCCAGCAACAGTCTGGTTCTCGCTGGTTGCTCGCTAATGGAATGGGGAAGAGCAATAATAAGCTTTCACTAATGAAGTCAAAGGCTGCATCAAAATCTAATGCTCCAGTTACCACAAAGGGGCAACCTGGTGGTGACTCCTTGTGGAGCATATCATCTCGTATTGATGGCGCTCGAGGAAAATGGAAGGAGTTGGCAGCACTAAATCCACATATAAGAAACCCCAATGTCATTATACCAAATTGA 3651 0.4404 MMLSRMEAGKKGGGGSSNQKKLLKDVETMNKALYLDRTSSRSSIPSANSRSKFTGKPQLPDPKSKSKASGDNNSENVQKDKKSIWNWRPLRALSHIRNKRFNCSFYLQVHLIEGLPPSFDDASLAVYWKRRDGVLVTQPAKVVQRVAEFEEKLTYTCSVYGSRSGPHHSAKYEAKHFLLYASLLSVPEMDLGKHRVDLTRLLPLTLEELEEEKSSGKWTTSFRLTGVAKGAAMNVSFGYTVVGDNASATRDSLPKALTSRQHSFAPTPTKLDVKPRQFDGSSKMRRATSLQYSSQAADEVKDLHEVLPLTKSALASSIDVLYTKLDEEKACSPLDDEAELDSFNLGPIKPDAYASDLGKERLEEHATKDENTCPVDDKPEPYVFQEKLETVKPDGYSLPDFENENPEHCLDNDFFVVDKGIELSSNESVKLEESIIKAPDDASTVDSASTLGISGIQISSEDSVKHDFLDDANDSSKDQAVVEEFASIKAPEDASTVDASCTLGISGIHVSSEDSVKHDFLDEANGLDTNELLMQELESALNSVSNLERVALESPKTVEAKLEFKMTKSHSLDDVTASVATEFLSMLGLDHSQMGLSSESEPESPRELLLRQFEKEALNGGFSSLFDFDMNYDNEADGGYDASAASEQWNFSEGVKSSSFLQDDLQEEHPVESQDVRSKQRAQMLEDLETEALMREWGLNEKAFHHSPPKDFAGFGSPIHLPPEEPPTLPPLDDGLGPFLQTKDGGFLRSMNPSIFKNSKSGGSLIMQVSNPVVVPAEMGSGIMEVLQCLASVGIEKLSMQAKELMPLEDITGKTMQQIAWEAMPVLEGAERQCHLQHDPIAWPDSAYVQRDLKGMPSKQKSGKFSSRTVANQTGSEFVSVEDLAPLAMDKIEALSMEGLRIQSGMSEEEAPSNIIAQSIGDISALQGKGVDVSGSLGLDGAAGLQLMDVKDSDDGGDGVDGIMSLSLTLDEWMKLDSGEIDDIDNISEHTSKLLAAHHANSFDFIRGSSKGEKRRGKSRRCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVEREFMLPKQRIFDSVSEIRKNYDEDDESEIVAKVEMKDTEKEEKSSEEDEGIPQFRITEVHVAGLKPEPQKKKLWGTSSQQQSGSRWLLANGMGKSNNKLSLMKSKAASKSNAPVTTKGQPGGDSLWSISSRIDGARGKWKELAALNPHIRNPNVIIPN 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01621 1216 CDD LysM 1180 1215 IPR018392 -
Gma15g01621 1216 Pfam LysM domain 1180 1215 IPR018392 -
Gma15g01621 1216 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1216 - -
Gma15g01621 1216 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 98 240 IPR019448 -
Gma15g01621 1216 ProSiteProfiles C2 NT-type domain profile. 93 241 IPR019448 -
Gma15g01621 1216 Coils Coil 530 550 - -
Gma15g01621 1216 Gene3D LysM domain 1178 1216 IPR036779 -
Gma15g01621 1216 MobiDBLite consensus disorder prediction 1162 1184 - -
Gma15g01621 1216 MobiDBLite consensus disorder prediction 1 80 - -
Gma15g01621 1216 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1216 IPR039614 -
Gma15g01621 1216 MobiDBLite consensus disorder prediction 33 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01621 Gma-Chr15 16058285 16062877 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01621 - - gmx:100815106 2255.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01621 15 16058285 16062877 Gma15g01621 15 16058285 16062877 ECH
Gma15g01621 15 16058285 16062877 Gma09g00611 09 6798037 6802068 GST
Gma17g00487 17 4002882 4003525 Gma15g01621 15 16058285 16062877 PCT
Gma13g00877 13 23008130 23010742 Gma15g01621 15 16058285 16062877 PCT
Gma15g01621 15 16058285 16062877 Gma17g00487 17 4002882 4003525 PCT
Gma15g01621 15 16058285 16062877 Gma13g00877 13 23008130 23010742 PCT