LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma09g00611	ATGTTGTCGAGAATGGAGGCTGGGAAGAAGGGTGGTGGGGGTTCTAGTAACCAGAAGAAGTTGTTGAAGGATGTTGAAACCATGAACAAAGCTTTGTACTTGGATAGAAACTCTTCAAGGAGTTCAATACCTAGTGCAAATTCTAGATCTAAATTCACAGGGAAACCTCAGTTGCCTGATCCAAGATCCAAGTCTAAAGCCAGTAATGATCATAATGGTGAGAATGCTCAGAAGGATAAGAAGTCCATATGGAATTGGAGGCCATTAAGGGCCCTTTCGCACATTCGAAATAAGAGGTTCAATTGTAGTTTTTATCTGCAAGTTCATTTGATTGAGGGGTTGCCGCCGAGTTTTGATGATGCCGGCCTTGCTGTTTACTGGAAGAGGCGGGACGGGGTTCTCGTGACCCAGCCGGCCAAGGTGGTTCAGTGTGTGGCTGAATTTGAGGAGAAGTTGACCTACACTTGTTCGGTGTATGGAAGCAGGAGCGGACCTCACCATTCTGCAAAGTATGAAGCGAAGCATTTTTTGCTCTATGCTTCGCTTCTCAGTGTGCCGGAGATGGATTTGGGGAAGCACCGGGTGGATCTGACGAGGTTGCTTCCTCTCACTCTGGAGGAGCTTGAGGAGGAGAAGAGCTCGGGGAAGTGGACTACTAGTTTTCGATTAATGGGATTGGCCAAGGGCGCTACGATGAATGTCAGTTTTGGGTATACTGTGGTTGGTGATAATGCTAGTGCTACCAGAGACAGCCTTCCGAAAGCATTGTCCTCCAGGCAGAATAGTTTTTCTCTGACTCCGACGAAGTTTGATGTTAAACCCAGACAGTTTGATGGAAGCAGCACGATGAGACGTGCCACAAGTTTGCAATACTCACCTCAAGCTTCTGACGAGGTAAAGGATCTTCATGAGGTGTTGCCATTAACTAAGTCAGCACTAGCTAGCTCAATAAACGTCTTATATAAGAAATTGGATGAAGAAAAGTTATGTAGCCCTCAGGATGATAAGACAGAACTTGATTCATTCACAGAAAATCTTGGGCCAATCAAGCCAGATGCCTATGCTTCTGATCTTGGAAAAGAAAGGCTTGAAGAGCATGCGACTAAGGATGAAAGTACATGTGACAAACCTGAACTCTATGTATTTCAAGAAAAGCTGGAGACAGTTAAACCAGATGGCTATTCTTTACCAGATTTTGGAAACAAAAACCCTGAACAGTGTCATGATAATGAATTTTTTGTTGTCGATAAGGGCATAGAACTTTCATCAAACGAACCTGTTAAACTAGAGGAATCCATCATAAAGGCTCCCGACGATGCTTCTACGGTTGATACTGTCTGTACCCTTGGTATATCAGGTATACAAATATCTTCTGAAGATAGTGTTAAACATGATTTTCTGGATGAGGCAAATGATAGTTCTAAGGATCAAGGAGTGGTAGAGGAATTTGCTAGCATAAAGGCTCCTGAGGATGCTTCTACAGTTGATACTTCGTGTACCCTTGGTATATCAGGCACACAAGTATCTTCTGAAGATAGTGTTGAACATGATTTTTTGGATGAGGCAAATGGCTTGGACACTAATGAGCTGCTCATGCAAGAACTAGAATCTGCTTTAAATAGTGTCTCGAATTTGGAGAGAGTGGCACTAGAATCTCCTAAAACTACAGAAGCGAAATCGGAACATAAAATGACAAAGTCACATAGCTTGGATGATGTTACAGCATCTGTTGCCACTGAATTTTTAAGCATGTTAGGCTTAGACCACAGTCCAATGGGCTTGAGTTCTGAAAGCGAGCCCGAGTCTCCAAGAGAGCTACTTTTAAGACAATTTGAGAAGGAAGCTCTGAATGGGGGCTTCTCTTCTTTGTTTGATTTTGACATGAACTATGATAGTGAAGCAGCTGGTGGCTATGATGCTTCTGCTTCTTCTGAGCAGTGGAACTTTTCTGAAGGTGTCAAGTCATCATCCTTCTTGCAAGATCTGCCGGAGGAGCCTCCAGTTGAATCTCAGGATGTTAGGAGCAAACAGAGGGCTCAAATGCTAGAAGACTTGGAAACAGAAGCCTTGATGCGTCAATGGGGTTTGAATGAGAATGCTTTTCATCATTCTCCACCGAAAGATTTTGCTGGTTTTGGAAGTCCAATTCATTTACCACCTGAAGAGCCTCCCACATTGCCTCCTCTTGATGATGGGTTGGGCCCTTTTCTTCAGACAAAAGATGGGGGTTTTCTACGCACTATGAGTCCCTCAATTTTCAAGAATTCTAAAAGTTGTGGGAGCTTAATCATGCAGGTATCCAACCCTGTTGTGGTACCCGCAGAAATGGGTTCTGGGATAATGGAGGTTTTGCAGTGTTTGGCATCAGTGGGTATTGAAAAGCTCTCAATGCAGGCAAAGGAGTTAATGCCGCTGGAAGATATCACAGGGAAGACAATGCAACAGATAGCATGGGAAGCTATGCCTTCCTTAGAGGGTGCAGAGAGGCAATGCCATTTGCAGCATGATCCAATAACAGTGCCAGACAGTGCTGGTGTGCAAAGGGACTTGAAAGGAATGCCATCTAAACAAAAGTCTGGCAAGTTTAGTTCAAGGACAGTGGCCAACCAAACAGGCTCGGAGTTTGTTTCAGTAGAAGACCTTGCTCCATTGGCTATGGATAAAATTGAAGCACTTTCAATGGAGGGTTTGAGAATCCAATCTGGGATGTCGGAAGAGGAAGCACCATCAAACATTATTGCTCAGTCCATTGGAGATATTTCAGCTCTCCAGGGCAAGGGGGTTGATATTAGTGGGTCCCTTGGCCTGGATGGAGCTGCTGGTTTGCAGCTGATGGATGTAAAAGACGGTGGTGATGGTGTTGATGGGATAATGAGCTTATCATTAACTCTTGATGAATGGATGAAGCTGGATTCAGGTGAGATTGATGATATAGATAATATCAGTGAGCACACTTCCAAACTTCTTGCAGCCCATCATGCCAACTCTTTTGACTTCATTCGTGGGAGTTCAAAGGGAGAGAAGAGACGAGGCAAAAGCAGATGTGGTTTGCTAGGAAACAATTTCACAGTAGCATTAATGGTGCAACTCCGTGATCCTATGAGAAACTATGAGCCGGTTGGAACACCAATGCTTGCTCTTATACAAGTTGAGAGAGAGTTCATACTTCCAAAGCAAAGAATTTTCTACAGTGTGTCTGAGATAAGGAAAAATTATTATGAGGATGACGAGAGCAAAATAGTAGCAAAATTGAAGACGAAGGACACCGAGAAAGAGGAGAAAAGTTCTGAAGAGGAAGGGGGCATTCCTCAGTTCAGAATCACTGAAGTCCATGTGGCAGGTCTGAAGCCTGAGCCTCAGAAAAAGAAGCTTTGGGGCACTTCAAGCCAGCAACAGTCTGGTTCTCGCTGGTTGCTCGCCAATGGAATGGGGAAGAGCAATAATAAGCTTTCACTGATGAAGTCAAAGGCTGCGTCTAAATCTAATGCTCCAGTTACCACAAAGGGGCAACCTGGTGACAGCTTGTGGAGCATATCATCTCGTATTGATGGTGCTCGAGGAAAATGGAAGGAGTTGGCTGCACTAAATCCACATATAAGAAACCCCAATGTCATTTTACCAAATTGA	3627	0.4403	MLSRMEAGKKGGGGSSNQKKLLKDVETMNKALYLDRNSSRSSIPSANSRSKFTGKPQLPDPRSKSKASNDHNGENAQKDKKSIWNWRPLRALSHIRNKRFNCSFYLQVHLIEGLPPSFDDAGLAVYWKRRDGVLVTQPAKVVQCVAEFEEKLTYTCSVYGSRSGPHHSAKYEAKHFLLYASLLSVPEMDLGKHRVDLTRLLPLTLEELEEEKSSGKWTTSFRLMGLAKGATMNVSFGYTVVGDNASATRDSLPKALSSRQNSFSLTPTKFDVKPRQFDGSSTMRRATSLQYSPQASDEVKDLHEVLPLTKSALASSINVLYKKLDEEKLCSPQDDKTELDSFTENLGPIKPDAYASDLGKERLEEHATKDESTCDKPELYVFQEKLETVKPDGYSLPDFGNKNPEQCHDNEFFVVDKGIELSSNEPVKLEESIIKAPDDASTVDTVCTLGISGIQISSEDSVKHDFLDEANDSSKDQGVVEEFASIKAPEDASTVDTSCTLGISGTQVSSEDSVEHDFLDEANGLDTNELLMQELESALNSVSNLERVALESPKTTEAKSEHKMTKSHSLDDVTASVATEFLSMLGLDHSPMGLSSESEPESPRELLLRQFEKEALNGGFSSLFDFDMNYDSEAAGGYDASASSEQWNFSEGVKSSSFLQDLPEEPPVESQDVRSKQRAQMLEDLETEALMRQWGLNENAFHHSPPKDFAGFGSPIHLPPEEPPTLPPLDDGLGPFLQTKDGGFLRTMSPSIFKNSKSCGSLIMQVSNPVVVPAEMGSGIMEVLQCLASVGIEKLSMQAKELMPLEDITGKTMQQIAWEAMPSLEGAERQCHLQHDPITVPDSAGVQRDLKGMPSKQKSGKFSSRTVANQTGSEFVSVEDLAPLAMDKIEALSMEGLRIQSGMSEEEAPSNIIAQSIGDISALQGKGVDISGSLGLDGAAGLQLMDVKDGGDGVDGIMSLSLTLDEWMKLDSGEIDDIDNISEHTSKLLAAHHANSFDFIRGSSKGEKRRGKSRCGLLGNNFTVALMVQLRDPMRNYEPVGTPMLALIQVEREFILPKQRIFYSVSEIRKNYYEDDESKIVAKLKTKDTEKEEKSSEEEGGIPQFRITEVHVAGLKPEPQKKKLWGTSSQQQSGSRWLLANGMGKSNNKLSLMKSKAASKSNAPVTTKGQPGDSLWSISSRIDGARGKWKELAALNPHIRNPNVILPN	1208

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma09g00611	1208	MobiDBLite	consensus disorder prediction	64	80	-	-
	Gma09g00611	1208	PANTHER	PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1	1	1208	IPR039614	-
	Gma09g00611	1208	Coils	Coil	528	548	-	-
	Gma09g00611	1208	PANTHER	PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1	1	1208	-	-
	Gma09g00611	1208	MobiDBLite	consensus disorder prediction	1	80	-	-
	Gma09g00611	1208	Pfam	LysM domain	1170	1207	IPR018392	-
	Gma09g00611	1208	Pfam	N-terminal C2 in EEIG1 and EHBP1 proteins	97	241	IPR019448	-
	Gma09g00611	1208	Gene3D	LysM domain	1156	1208	IPR036779	-
	Gma09g00611	1208	MobiDBLite	consensus disorder prediction	841	866	-	-
	Gma09g00611	1208	ProSiteProfiles	LysM domain profile.	1165	1208	IPR018392	-
	Gma09g00611	1208	MobiDBLite	consensus disorder prediction	32	54	-	-
	Gma09g00611	1208	CDD	LysM	1170	1207	IPR018392	-
	Gma09g00611	1208	MobiDBLite	consensus disorder prediction	1155	1176	-	-
	Gma09g00611	1208	ProSiteProfiles	C2 NT-type domain profile.	92	240	IPR019448	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma09g00611	Gma-Chr9	6798037	6802068	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma09g00611	-		-	gmx:100806958	2231.06

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma09g00611	09	6798037	6802068	Gma09g00611	09	6798037	6802068	ECH
	Gma15g01621	15	16058285	16062877	Gma09g00611	09	6798037	6802068	GST
	Gma17g00487	17	4002882	4003525	Gma09g00611	09	6798037	6802068	PCT
	Gma13g00877	13	23008130	23010742	Gma09g00611	09	6798037	6802068	PCT
	Gma09g00611	09	6798037	6802068	Gma17g00487	17	4002882	4003525	PCT
	Gma09g00611	09	6798037	6802068	Gma13g00877	13	23008130	23010742	PCT