Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00877 ATGTCGAAAACTGAAGGTGGGCAAAAGAGTGCTGAAGAGGAGAACGACGTGTTATTAAAAGACAATTGGAAGCCATTGAAGGCACTTTGCCTCACTCGCAATAAGAGGTTTAATTGTAGTTTTTCTGTGCAAGTCCATTTGATTGAAGGGTTGCCTTTGAGTTTCAATGATTTTAGCCTCTGTGTGCATTGGAAGAGGAGGGGTGCACTTTTGGTGACCCCTCCAGCTAAGGTGATTCAAGGTGTGGCTGAGTTTCAAGACATTTTGACTCGCAATTGTTCAATCCATGGAAGTAGGAGTGGACCCCATAATTCTGCTAAATATGAAGCTAAGCATTTTATGCTGCTTCTTTCCTTGGAGAAAAACTCTGGGAAATGGACTACAAGTTTTGTATTATCAGGAACTGCAAGGGGTGCAGTAATGAATGTCAGTTTTGGGTATGTGATTGCATTCGATGAAGAGAAGAGCTGTAGTCCTCAGCATGGTAAACCTGAACTTGAAGTATTTAAAGAAAATATTGATTTAATCAAACTGGTTGTCTGTGATAGTGAAAAAGAAAAGCCAGAGGAGAATTCAGGTAATGAAGGAAAAACATGCAGTCTGGTGCATGTCAAACCTGAATTAGATGTGTTTCAAGAAATCCTGGAGACAGTTAAGCCAGATGATTATCGCTTACCTGATTCTGGAATAGAAAGTTTCAAAGAGCGTGAAGGTAATGAATTTTCTGTTATTGATCAGGGCATCGAATTTTCACCAAACAAACGTGTTAAACTAGAGGAATCTATCATAAAAGCTGTTGTTGATGCCTGTACTGTTGACAGTACTTGGGCCCTTTATACTGATGCGCTTTGCTACATGAATTTTCTCAAAAAGGATGGCTTATGCACAAAAGAACTTCTACTGCAAGAACTAGAATTAGCTTTAAATAGTGTCTCAGAGTTGGAGACAGTGGCAATGGAATCTCCTAATATCATGGAAGCCAAATCTGAATACAAGTTGAGAAAGTCACATAGTTTAGATGATGTTACAGAATCAGTTGCCAGTGGGTTTTTAAGTATGCTTGGCTTAGATCATAGTCCAATGGGTTTGAGCTTTGAAAGTGAGCCCGAGTCTCCAAGAGAGTGCCTTTTAAGACAATTCAAGAAGGAAGCTCTTTCTGAGGGCTTCTCTTTACCAAAGAATGGGGGGTTTCTATGGTCAATGAATCCCTCACTTTTCAGGAATAGTAGAAGTGGTGGGACATTAATCATGCAGGTTTCCAACCCTTTGGTTATGCTGGCTGAAATGGGTTCTGGGATAATGGAGATTTTGCAGTGTTTGGCTTCATTGGGAATTGAAAAGCTTTCCATGCAGGCAAACAAGTTAATACCTCTGGAAGATATCACAGGGAAGACAATGCAACAAATATCAAGGGAAGCAAAGCTAGTCCTGGAAGAAACACACAGACAATACCATTTGCAGCATGATTTGGTGACAGGACAAGATTCTATTTGCACACAAAGTGGCTTGAAAGGAACATTATCTGGTGGACTAGAGTCTGATAAGTTTAGTTCAAGTTCTATTGGTGACCAGAGAGGCTCGGAGTTTGTTTCGTTGGAAGATCTTGCCCCATTAGCTatggataaagttgaagcactttga 1641 0.3979 MSKTEGGQKSAEEENDVLLKDNWKPLKALCLTRNKRFNCSFSVQVHLIEGLPLSFNDFSLCVHWKRRGALLVTPPAKVIQGVAEFQDILTRNCSIHGSRSGPHNSAKYEAKHFMLLLSLEKNSGKWTTSFVLSGTARGAVMNVSFGYVIAFDEEKSCSPQHGKPELEVFKENIDLIKLVVCDSEKEKPEENSGNEGKTCSLVHVKPELDVFQEILETVKPDDYRLPDSGIESFKEREGNEFSVIDQGIEFSPNKRVKLEESIIKAVVDACTVDSTWALYTDALCYMNFLKKDGLCTKELLLQELELALNSVSELETVAMESPNIMEAKSEYKLRKSHSLDDVTESVASGFLSMLGLDHSPMGLSFESEPESPRECLLRQFKKEALSEGFSLPKNGGFLWSMNPSLFRNSRSGGTLIMQVSNPLVMLAEMGSGIMEILQCLASLGIEKLSMQANKLIPLEDITGKTMQQISREAKLVLEETHRQYHLQHDLVTGQDSICTQSGLKGTLSGGLESDKFSSSSIGDQRGSEFVSLEDLAPLAMDKVEAL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00877 546 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 34 125 IPR019448 -
Gma13g00877 546 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 393 546 IPR039614 -
Gma13g00877 546 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 118 391 IPR039614 -
Gma13g00877 546 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 22 118 IPR039614 -
Gma13g00877 546 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 118 391 - -
Gma13g00877 546 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 22 118 - -
Gma13g00877 546 ProSiteProfiles C2 NT-type domain profile. 29 214 IPR019448 -
Gma13g00877 546 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 393 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00877 Gma-Chr13 23008130 23010742 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00877 - - gra:105768246 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00877 13 23008130 23010742 Gma13g00877 13 23008130 23010742 ECH
Gma17g00487 17 4002882 4003525 Gma13g00877 13 23008130 23010742 GST
Gma13g00877 13 23008130 23010742 Gma15g01621 15 16058285 16062877 PCT
Gma13g00877 13 23008130 23010742 Gma09g00611 09 6798037 6802068 PCT
Gma15g01621 15 16058285 16062877 Gma13g00877 13 23008130 23010742 PCT
Gma09g00611 09 6798037 6802068 Gma13g00877 13 23008130 23010742 PCT